@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2243: (2016-05-08 )
MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKDVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]




GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]




GOL_A_2(3K89)
?
[Raw transfer]




GOL_A_2(3K89)
?
[Raw transfer]




NHE_A_2(3R97)
?
[Raw transfer]




CXS_A_14(3HJV)
?
[Raw transfer]




ACY_A_4(1NM2)
?
[Raw transfer]




GLY_A_2(3TQE)
?
[Raw transfer]




ACY_A_4(1NM2)
?
[Raw transfer]




ACY_A_4(1NM2)
?
[Raw transfer]




ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]




ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]




AE4_A_9(2C2N)
FABD_HUMAN
[Raw transfer]




2 PsiBlast_PDB 99.59100%-110 - C2 -2QC3 3.9 FABD_MYCTU
21 PsiBlast_CBE 99.03100%-110 - C2 -2QJ3 - FABD_MYCTU -
1 PsiBlast_PDB 98.29100%-112 - C2 -2QJ3 - FABD_MYCTU -
76 HHSearch 97.9598%-109 - C2 -2QC3 3.9 FABD_MYCTU
85 Fugue 81.1653% -98 - C2 -1NM2 2.8 ?
3 PsiBlast_PDB 79.8552% -97 - C2 -1NM2 2.8 ?
71 HHSearch 79.3453% -97 - C2 -1NM2 2.8 ?
14 PsiBlast_PDB 75.1432% -81 - C2 -3H0P - FABD_SALTY -
82 HHSearch 73.6132% -89 - C2 -3K89 2.8 ?
12 PsiBlast_PDB 73.1033% -84 - C2 -3K89 2.8 ?
8 PsiBlast_PDB 72.5332% -79 - C2 -2G1H 2.3 FABD_ECOLI
13 PsiBlast_PDB 72.4533% -81 - C2 -3R97 2.3 ?
9 PsiBlast_PDB 72.4032% -76 - C2 -2G2O - FABD_ECOLI -
17 PsiBlast_PDB 72.3033% -83 - C2 -2CUY - ? -
10 PsiBlast_PDB 72.2832% -78 - C2 -2G2Y - FABD_ECOLI -
11 PsiBlast_PDB 72.2132% -78 - C2 -2G2Z 6.2 FABD_ECOLI
69 HHSearch 72.0528% -85 - C2 -3QAT - ? -
6 PsiBlast_PDB 71.9231% -84 - C2 -2H1Y - ? -
79 HHSearch 71.7733% -88 - C2 -1MLA - FABD_ECOLI -
65 HHSearch 71.7328% -82 - C2 -3PTW - ? -
20 PsiBlast_PDB 70.5330% -86 - C2 -3TQE 3.2 ?