@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2259: (2016-05-09 )
MSQTVRGVIARQKGEPVELVNIVVPDPGPGEAVVDVTACGVCHTDLTYREGGINDEYPFLLGHEAAGIIEAVGPGVTAVEPGDFVILNWRAVCGQCRACKRGRPRYCFDTFNAEQKMTLTDGTELTAALGIGAFADKTLVHSGQCTKVDPAADPAVAGLLGCGVMAGLGAAINTGGVTRDDTVAVIGCGGVGDAAIAGAALVGAKRIIAVDTDDTKLDWARTFGATHTVNAREVDVVQAIGGLTDGFGADVVIDAVGRPETYQQAFYARDLAGTVVLVGVPTPDMRLDMPLVDFFSHGGALKSSWYGDCLPESDFPTLIDLYLQGRLPLQRFVSERIGLEDVEEAFHKMHGGKVLRSVVML

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BNF_A_10(1U3U)
ADH1B_HUMAN
[Raw transfer]




BNF_B_11(1U3U)
ADH1B_HUMAN
[Raw transfer]




HPL_B_11(1U3V)
ADH1B_HUMAN
[Raw transfer]




GOL_B_12(4DLA)
?
[Raw transfer]




NAD_A_7(1CDO)
ADH1_GADMC
[Raw transfer]




NAD_A_7(1CDO)
ADH1_GADMC
[Raw transfer]




ACY_A_7(4RQT)
ADH1_ARATH
[Raw transfer]




CXF_A_4(1E3I)
ADH4_MOUSE
[Raw transfer]




ACY_A_7(4RQT)
ADH1_ARATH
[Raw transfer]




PYZ_B_11(1DEH)
ADH1B_HUMAN
[Raw transfer]




PYZ_B_11(1HDY)
ADH1B_HUMAN
[Raw transfer]




PYZ_A_9(1HDY)
ADH1B_HUMAN
[Raw transfer]




PYZ_B_11(1HTB)
ADH1B_HUMAN
[Raw transfer]




PYZ_A_9(1HTB)
ADH1B_HUMAN
[Raw transfer]




CXF_B_8(1E3I)
ADH4_MOUSE
[Raw transfer]




PYZ_A_9(1DEH)
ADH1B_HUMAN
[Raw transfer]




38 PsiBlast_CBE 94.3532%-119 - C1 -1P0C - ADH8_PELPE -
7 PsiBlast_PDB 93.4134%-114 - C1 -1CDO - ADH1_GADMC -
19 PsiBlast_PDB 93.3032%-116 - C1 -1P0F - ADH8_PELPE -
5 PsiBlast_PDB 93.1334%-113 - C1 -4DLB - ? -
18 PsiBlast_PDB 91.8632%-117 - C1 -1P0C - ADH8_PELPE -
37 PsiBlast_CBE 90.7032%-117 - C1 -1P0F - ADH8_PELPE -
15 PsiBlast_PDB 90.5733%-118 - C1 -1U3T - ADH1A_HUMAN -
2 PsiBlast_PDB 90.5332%-113 - C1 -4RQU - ADH1_ARATH -
23 PsiBlast_CBE 90.5234%-112 - C1 -4DLA 2.1 ?
130 Fugue 90.4934%-116 - C1 -1CDO 11.1 ADH1_GADMC
33 PsiBlast_CBE 90.4233%-119 - C1 -1U3T - ADH1A_HUMAN -
3 PsiBlast_PDB 90.3934%-112 - C1 -4DL9 - ? -
1 PsiBlast_PDB 90.3732%-115 - C1 -4RQT 3.6 ADH1_ARATH
26 PsiBlast_CBE 90.0134%-110 - C1 -1CDO - ADH1_GADMC -
42 PsiBlast_CBE 89.9031%-115 - C1 -4GL4 - ADHX_ARATH -
117 HHSearch 89.5235%-116 - C1 -1CDO 11.1 ADH1_GADMC
21 PsiBlast_CBE 89.0332%-112 - C1 -4RQU - ADH1_ARATH -
22 PsiBlast_CBE 88.9934%-113 - C1 -4DLB - ? -
24 PsiBlast_CBE 88.8234%-113 - C1 -4DL9 - ? -
4 PsiBlast_PDB 88.3934%-112 - C1 -4DLA - ? -
36 PsiBlast_CBE 87.0832%-115 - C1 -1HTB 4.0 ADH1B_HUMAN
116 HHSearch 85.6231%-114 - C1 -4RQT 3.6 ADH1_ARATH
10 PsiBlast_PDB 85.2932%-114 - C1 -1DEH 3.2 ADH1B_HUMAN
17 PsiBlast_PDB 85.2332%-115 - C1 -1HTB 3.9 ADH1B_HUMAN
32 PsiBlast_CBE 85.0332%-115 - C1 -1DEH 2.8 ADH1B_HUMAN
29 PsiBlast_CBE 84.8432%-115 - C1 -1U3U 2.5 ADH1B_HUMAN
25 PsiBlast_CBE 84.6732%-116 - C1 -1HDY 2.7 ADH1B_HUMAN
50 PsiBlast_CBE 84.4932%-111 - C1 -1E3I 2.1 ADH4_MOUSE
28 PsiBlast_CBE 84.4232%-113 - C1 -1U3V 2.6 ADH1B_HUMAN
6 PsiBlast_PDB 84.4232%-115 - C1 -1HDY 3.4 ADH1B_HUMAN
49 PsiBlast_CBE 83.0032%-111 - C1 -1E3I 2.4 ADH4_MOUSE
12 PsiBlast_PDB 82.6932%-115 - C1 -1U3U 3.1 ADH1B_HUMAN