@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2298: (2016-05-09 )
MKYLDVDGIGQVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGDDRTEVVVASKVFPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENRPGGVRALNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGVVAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARAFRPVSTGRFLTDMVREKVSRR

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_2(5C7H)
?
[Raw transfer]



NDP_A_2(5C7H)
?
[Raw transfer]



NAP_A_3(1PZ1)
GS69_BACSU
[Raw transfer]



NAP_A_2(4PMJ)
?
[Raw transfer]



NAP_A_2(4WGH)
?
[Raw transfer]



GOL_A_17(1YNP)
?
[Raw transfer]



NAP_A_2(4WGH)
?
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]
36 HHSearch 98.5731% -90 - C2 -1PYF - IOLS_BACSU -
33 HHSearch 96.6031% -87 - C2 -1PZ1 11.4 GS69_BACSU
5 PsiBlast_PDB 95.8531% -92 - C2 -1PZ0 - IOLS_BACSU -
4 PsiBlast_PDB 94.5331% -93 - C2 -1PYF - IOLS_BACSU -
27 HHSearch 92.0427% -84 - C2 -3N2T - ? -
28 HHSearch 91.3428% -79 * C2 *1LQA - TAS_ECOLI -
34 HHSearch 91.3134% -88 - C2 -5C7H 11.1 ?
9 PsiBlast_PDB 89.5932% -91 - C2 -4XAP - ? -
38 HHSearch 89.2428% -75 - C2 -3LUT - KCAB2_RAT -
50 Fugue 89.1727% -85 - C2 -1QRQ - KCAB2_RAT -
6 PsiBlast_PDB 88.8331% -88 - C2 -1PZ1 - GS69_BACSU -
32 HHSearch 88.8127% -80 - C2 -3EAU - KCAB2_RAT -
49 Fugue 88.5627% -79 - C2 -1QRQ - KCAB2_RAT -
18 PsiBlast_PDB 88.5528% -93 - C2 -4JTD - KCAB2_RAT -
19 PsiBlast_PDB 88.5028% -90 - C2 -3EAU - KCAB2_RAT -
8 PsiBlast_PDB 88.1332% -93 - C2 -5C7H 11.2 ?
12 PsiBlast_PDB 87.8428% -91 - C2 -3EB3 - KCAB2_RAT -
17 PsiBlast_PDB 87.6228% -93 - C2 -4JTC - KCAB2_RAT -
41 HHSearch 87.5725% -77 - C2 -2BP1 - ARK72_HUMAN -
15 PsiBlast_PDB 87.5728% -95 - C2 -3LNM - KCAB2_RAT -
10 PsiBlast_PDB 61.6732% -9 - C2 -4PMJ 3.8 ?
37 HHSearch 59.3132% 2 - C2 -4WGH 6.2 ?
7 PsiBlast_PDB 55.7033% 13 - C2 -4WGH 6.0 ?