@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2361c: (2016-05-10 )
MARDARKRTSSNFPQLPPAPDDYPTFPDTSTWPVVFPELPAAPYGGPCRPPQHTSKAAAPRIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFGSA

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H78_A_3(3WYJ)
UPPS_ECOLI
[Raw transfer]



GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]



GPP_D_19(2VG3)
DPDS_MYCTU
[Raw transfer]



DPO_C_20(2VG2)
DPDS_MYCTU
[Raw transfer]



40B_B_4(4ONC)
DPDS_MYCTU
[Raw transfer]



B75_B_5(2E9C)
UPPS_ECOLI
[Raw transfer]



GPP_B_9(2VG3)
DPDS_MYCTU
[Raw transfer]



B08_A_3(2E99)
UPPS_ECOLI
[Raw transfer]



GPP_C_15(2VG3)
DPDS_MYCTU
[Raw transfer]



IPE_A_3(1X09)
UPPS_ECOLI
[Raw transfer]



IPE_A_4(1X07)
UPPS_ECOLI
[Raw transfer]



FPP_C_3(1V7U)
UPPS_ECOLI
[Raw transfer]



B29_A_3(2E98)
UPPS_ECOLI
[Raw transfer]



FPS_C_3(1X08)
UPPS_ECOLI
[Raw transfer]



DPO_C_3(2DTN)
ISPT_HELPY
[Raw transfer]



FPP_B_15(4Q9M)
ISPT_STRR6
[Raw transfer]



FPP_A_4(4Q9M)
ISPT_STRR6
[Raw transfer]



FPP_A_4(4Q9M)
ISPT_STRR6
[Raw transfer]



2BJ_B_4(3SGV)
UPPS_ECOLI
[Raw transfer]



FPP_A_3(4H8E)
ISPT_STAAN
[Raw transfer]



FPP_A_3(4H8E)
ISPT_STAAN
[Raw transfer]



2BJ_B_4(3SGV)
UPPS_ECOLI
[Raw transfer]



FPS_A_3(4U82)
ISPT_STAAN
[Raw transfer]



FPS_A_4(1X06)
UPPS_ECOLI
[Raw transfer]



B28_B_5(2E9A)
UPPS_ECOLI
[Raw transfer]



2BJ_A_5(3SGV)
UPPS_ECOLI
[Raw transfer]



B76_A_3(2E9D)
UPPS_ECOLI
[Raw transfer]



GPP_A_3(2VG0)
ZFPP_MYCTU
[Raw transfer]



GPP_A_3(2VG0)
ZFPP_MYCTU
[Raw transfer]



GOL_B_19(2VG2)
DPDS_MYCTU
[Raw transfer]



GPP_B_4(2VG0)
ZFPP_MYCTU
[Raw transfer]



PIS_A_3(5HC8)
?
[Raw transfer]



PIS_A_3(5HC8)
?
[Raw transfer]



DST_A_4(5HC7)
?
[Raw transfer]



40B_A_3(4ONC)
DPDS_MYCTU
[Raw transfer]



B08_A_5(2E99)
UPPS_ECOLI
[Raw transfer]



IPE_B_15(2VG2)
DPDS_MYCTU
[Raw transfer]



B29_A_4(2E98)
UPPS_ECOLI
[Raw transfer]



B28_A_4(2E9A)
UPPS_ECOLI
[Raw transfer]



FPP_B_11(2VG1)
ZFPP_MYCTU
[Raw transfer]



B08_B_7(2E99)
UPPS_ECOLI
[Raw transfer]



B29_A_5(2E98)
UPPS_ECOLI
[Raw transfer]



IPE_A_4(1X09)
UPPS_ECOLI
[Raw transfer]



B29_B_8(2E98)
UPPS_ECOLI
[Raw transfer]



B75_A_6(2E9C)
UPPS_ECOLI
[Raw transfer]



2BJ_A_7(3SGV)
UPPS_ECOLI
[Raw transfer]
1 PsiBlast_PDB 99.84100%-107 - C- -2VG2 - DPDS_MYCTU -
25 PsiBlast_CBE 99.20100%-104 - C7 -2VG2 2.6 DPDS_MYCTU
23 PsiBlast_CBE 98.79100%-100 - C7 -2VG3 7.3 DPDS_MYCTU
24 PsiBlast_CBE 98.72100% -99 - C7 -2VG3 8.0 DPDS_MYCTU
22 PsiBlast_CBE 98.57100%-104 - C7 -2VG3 7.5 DPDS_MYCTU
80 HHSearch 98.50100% -97 - C7 -2VG3 7.9 DPDS_MYCTU
27 PsiBlast_CBE 98.49100% -99 - C7 -2VG2 4.3 DPDS_MYCTU
3 PsiBlast_PDB 98.46100% -98 - C7 -2VG3 - DPDS_MYCTU -
21 PsiBlast_CBE 98.38100%-102 - C7 -4ONC 4.4 DPDS_MYCTU
26 PsiBlast_CBE 97.90100% -99 - C7 -2VG2 3.8 DPDS_MYCTU
4 PsiBlast_PDB 97.71100%-104 - C7 -4ONC 7.1 DPDS_MYCTU
2 PsiBlast_PDB 97.61100% -96 - C7 -2VG4 - DPDS_MYCTU -
56 PsiBlast_CBE 73.9442% -93 - C7 -1UEH - UPPS_ECOLI -
13 PsiBlast_PDB 73.8042% -91 - C7 -1V7U 6.6 UPPS_ECOLI
59 PsiBlast_CBE 73.0938% -95 - C7 -5HC8 3.7 ?
57 PsiBlast_CBE 72.7541% -89 - C7 -1X09 4.9 UPPS_ECOLI
60 PsiBlast_CBE 72.7438% -94 - C7 -5HC7 2.5 ?
61 PsiBlast_CBE 72.6938% -96 - C7 -5HC6 - ? -
58 PsiBlast_CBE 72.4341% -89 - C7 -1X08 7.6 UPPS_ECOLI
82 HHSearch 72.4238% -92 - C7 -5HC8 3.7 ?
14 PsiBlast_PDB 72.4142% -89 - C7 -1X06 9.1 UPPS_ECOLI
48 PsiBlast_CBE 72.2642% -91 - C7 -3SGV 6.8 UPPS_ECOLI
15 PsiBlast_PDB 72.2242% -89 - C7 -1X07 6.0 UPPS_ECOLI
47 PsiBlast_CBE 71.8442% -98 - C7 -3SGV 6.7 UPPS_ECOLI
8 PsiBlast_PDB 71.8041% -94 - C7 -4Q9M 8.2 ISPT_STRR6
17 PsiBlast_PDB 71.7642% -84 - C7 -2E99 7.1 UPPS_ECOLI
79 HHSearch 71.7141% -94 * C7 *3SGV 6.7 UPPS_ECOLI
29 PsiBlast_CBE 71.6641% -93 - C7 -4Q9M 8.3 ISPT_STRR6
81 HHSearch 71.5239% -95 - C7 -4H8E 8.4 ISPT_STAAN
6 PsiBlast_PDB 71.3038% -96 - C7 -4U82 9.0 ISPT_STAAN
83 HHSearch 71.0242% -92 - C7 -4Q9M 8.2 ISPT_STRR6
5 PsiBlast_PDB 70.8138% -95 - C7 -4H8E 8.4 ISPT_STAAN
16 PsiBlast_PDB 70.3742% -84 - C7 -2E98 8.5 UPPS_ECOLI
54 PsiBlast_CBE 70.2242% -94 - C7 -2E98 5.3 UPPS_ECOLI
20 PsiBlast_PDB 70.1742% -94 - C7 -2E9D 4.0 UPPS_ECOLI
53 PsiBlast_CBE 70.1542% -95 - C7 -2E99 5.1 UPPS_ECOLI
18 PsiBlast_PDB 70.0342% -90 - C7 -2E9A 4.0 UPPS_ECOLI
52 PsiBlast_CBE 69.6942% -95 - C7 -2E9A 3.9 UPPS_ECOLI
19 PsiBlast_PDB 69.5942% -96 - C7 -2E9C 2.8 UPPS_ECOLI
42 PsiBlast_CBE 69.5242% -97 - C7 -3WYJ 10.2 UPPS_ECOLI
51 PsiBlast_CBE 68.7442% -93 - C7 -2E9C 7.0 UPPS_ECOLI
87 HHSearch 67.3235% -86 - C7 -2VG0 6.6 ZFPP_MYCTU
62 PsiBlast_CBE 66.0736% -88 - C7 -2DTN 4.7 ISPT_HELPY
65 PsiBlast_CBE 65.3535% -79 - C7 -2VG1 6.9 ZFPP_MYCTU
68 PsiBlast_CBE 65.3435% -77 - C7 -2VG0 6.6 ZFPP_MYCTU
67 PsiBlast_CBE 64.3635% -78 - C7 -2VG0 5.8 ZFPP_MYCTU