@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2384: (2016-05-10 )
MPPKAADGRRPSPDGGLGGFVPFPADRAASYRAAGYWSGRTLDTVLSDAARRWPDRLAVADAGDRPGHGGLSYAELDQRADRAAAALHGLGITPGDRVLLQLPNGCQFAVALFALLRAGAIPVMCLPGHRAAELGHFAAVSAATGLVVADVASGFDYRPMARELVADHPTLRHVIVDGDPGPFVSWAQLCAQAGTGSPAPPADPGSPALLLVSGGTTGMPKLIPRTHDDYVFNATASAALCRLSADDVYLVVLAAGHNFPLACPGLLGAMTVGATAVFAPDPSPEAAFAAIERHGVTVTALVPALAKLWAQSCEWEPVTPKSLRLLQVGGSKLEPEDARRVRTALTPGLQQVFGMAEGLLNFTRIGDPPEVVEHTQGRPLCPADELRIVNADGEPVGPGEEGELLVRGPYTLNGYFAAERDNERCFDPDGFYRSGDLVRRRDDGNLVVTGRVKDVICRAGETIAASDLEEQLLSHPAIFSAAAVGLPDQYLGEKICAAVVFAGAPITLAELNGYLDRRGVAAHTRPDQLVAMPALPTTPIGKIDKRAIVRQLGIATGPVTTQRCH

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IXN_B_8(3O83)
?
[Raw transfer]



IXN_A_3(3O83)
?
[Raw transfer]



HP8_B_6(3O82)
?
[Raw transfer]



1HZ_A_3(4IZ6)
ENTE_ECOLI
[Raw transfer]



1HZ_B_5(4IZ6)
ENTE_ECOLI
[Raw transfer]



1HZ_A_3(4IZ6)
ENTE_ECOLI
[Raw transfer]



HP8_A_3(3O82)
?
[Raw transfer]



AMP_D_4(1MDB)
DHBE_BACSU
[Raw transfer]



AMP_D_4(1MDB)
DHBE_BACSU
[Raw transfer]



AMP_A_2(1MD9)
DHBE_BACSU
[Raw transfer]



H90_A_3(3U17)
?
[Raw transfer]



H89_B_9(3U16)
?
[Raw transfer]



H90_B_9(3U17)
?
[Raw transfer]



HTJ_A_3(3O84)
?
[Raw transfer]



H89_A_3(3U16)
?
[Raw transfer]



HTJ_B_8(3O84)
?
[Raw transfer]



IXN_B_8(3O83)
?
[Raw transfer]
35 PsiBlast_PDB 98.4244%-100 - C4 -1MDB 5.8 DHBE_BACSU
37 PsiBlast_PDB 98.3344%-100 - C4 -1MD9 5.5 DHBE_BACSU
36 PsiBlast_PDB 98.3344%-100 - C4 -1MDF - DHBE_BACSU -
2 HHSearch 96.7744% -96 - C4 -1MDB 5.8 DHBE_BACSU
56 PsiBlast_CBE 90.1539% -99 - C4 -3RG2 - ENTB_ECOLI (first) -
58 PsiBlast_CBE 89.4439%-100 - C4 -3RG2 - ENTB_ECOLI (first) -
60 PsiBlast_CBE 89.3439% -96 - C4 -3RG2 - ENTB_ECOLI (first) -
63 PsiBlast_CBE 89.3039% -96 - C4 -3RG2 - ENTB_ECOLI (first) -
57 PsiBlast_CBE 89.2539% -98 - C4 -3RG2 - ENTB_ECOLI (first) -
39 PsiBlast_PDB 89.1739% -95 - C4 -4IZ6 5.2 ENTE_ECOLI
38 PsiBlast_PDB 89.0939% -95 - C4 -3RG2 - ENTB_ECOLI (first) -
61 PsiBlast_CBE 88.8539% -99 - C4 -3RG2 - ENTB_ECOLI (first) -
59 PsiBlast_CBE 88.5839% -96 - C4 -3RG2 - ENTB_ECOLI (first) -
62 PsiBlast_CBE 88.4139% -95 - C4 -3RG2 - ENTB_ECOLI (first) -
64 PsiBlast_CBE 88.3539% -97 - C4 -4IZ6 5.7 ENTE_ECOLI
55 PsiBlast_CBE 88.2039% -99 - C4 -3RG2 - ENTB_ECOLI (first) -
10 HHSearch 87.0139% -95 - C4 -4IZ6 5.2 ENTE_ECOLI
42 PsiBlast_PDB 79.5538%-101 - C4 -3O84 6.6 ?
41 PsiBlast_PDB 79.2238% -99 - C4 -3O83 2.3 ?
69 PsiBlast_CBE 79.0338% -99 - C4 -3O82 6.9 ?
44 PsiBlast_PDB 79.0338%-101 - C4 -3U17 7.9 ?
67 PsiBlast_CBE 78.9938%-101 - C4 -3O84 6.9 ?
68 PsiBlast_CBE 78.9038% -98 * C4 *3O83 9.7 ?
43 PsiBlast_PDB 78.8938%-100 - C4 -3U16 7.7 ?
6 HHSearch 78.7438% -99 - C4 -3O83 9.6 ?
65 PsiBlast_CBE 78.5438% -99 - C4 -3U17 7.8 ?
66 PsiBlast_CBE 78.0238% -97 - C4 -3U16 8.4 ?
40 PsiBlast_PDB 77.6838% -98 - C4 -3O82 7.3 ?