@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2406c: (2016-05-10 )
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVVGIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_8(3FHM)
?
[Raw transfer]



NAD_D_(2RC3)
?
[Raw transfer]



NAD_B_5(4FRY)
?
[Raw transfer]



AMP_C_11(3FHM)
?
[Raw transfer]



NAD_B_5(4FRY)
?
[Raw transfer]



NAD_B_5(4FRY)
?
[Raw transfer]



NAI_D_15(3FHM)
?
[Raw transfer]



NAD_D_(2RC3)
?
[Raw transfer]



NAD_D_(2RC3)
?
[Raw transfer]



NAI_B_9(3FHM)
?
[Raw transfer]



NAI_C_12(3FHM)
?
[Raw transfer]



NAI_D_15(3FHM)
?
[Raw transfer]



NAI_C_12(3FHM)
?
[Raw transfer]



NAI_D_15(3FHM)
?
[Raw transfer]
26 PsiBlast_CBE 92.8040%-160 - C1 -2RC3 - ? -
27 PsiBlast_CBE 92.5840%-154 - C1 -2RC3 - ? -
25 PsiBlast_CBE 92.0040%-153 - C1 -2RC3 6.9 ?
3 PsiBlast_PDB 91.9340%-157 - C1 -2RC3 3.6 ?
41 HHSearch 90.6144%-146 - C1 -3FHM 3.2 ?
1 PsiBlast_PDB 89.6144%-148 - C1 -3FHM 3.2 ?
23 PsiBlast_CBE 89.5444%-154 - C1 -3FHM 6.1 ?
22 PsiBlast_CBE 88.1944%-147 - C1 -3FHM 6.9 ?
43 HHSearch 86.8837%-147 - C1 -4FRY 3.0 ?
21 PsiBlast_CBE 86.8244%-159 - C1 -3FHM 5.6 ?
2 PsiBlast_PDB 86.0438%-148 - C1 -4FRY 3.0 ?
49 HHSearch 85.4639%-154 - C1 -2RC3 3.6 ?
24 PsiBlast_CBE 84.3638%-145 - C1 -4FRY 6.5 ?
7 PsiBlast_PDB 79.0626%-151 - C1 -3LFZ - Y1225_METJA -
6 PsiBlast_PDB 79.0026%-145 - C1 -3KH5 - Y1225_METJA -
20 PsiBlast_PDB 77.3126%-152 - C1 -4ESY - ? -
59 HHSearch 74.9224%-134 - C1 -2UV4 - -
51 HHSearch 72.3923%-140 - C1 -4GQW - CBSX1_ARATH -
61 Fugue 72.3722%-123 - C1 -2V8Q - AAKG1_RAT -
60 HHSearch 72.3324%-139 - C1 -2OUX - MGTE_ENTFA -