@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2436: (2016-05-10 )
MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_5(3GO6)
?
[Raw transfer]



ACP_A_6(1GQT)
RBSK_ECOLI
[Raw transfer]



ACP_B_9(1GQT)
RBSK_ECOLI
[Raw transfer]



ADP_A_17(1RK2)
RBSK_ECOLI
[Raw transfer]



ADP_C_19(1RK2)
RBSK_ECOLI
[Raw transfer]



ATP_A_5(3IKH)
?
[Raw transfer]



ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]



ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]



ADP_B_18(1RK2)
RBSK_ECOLI
[Raw transfer]



GOL_A_2(3RY7)
?
[Raw transfer]



ADP_D_20(1RK2)
RBSK_ECOLI
[Raw transfer]



ADP_A_6(4XDA)
?
[Raw transfer]



ADP_B_9(4XDA)
?
[Raw transfer]



ACP_C_12(1GQT)
RBSK_ECOLI
[Raw transfer]



ADP_A_6(4XCK)
?
[Raw transfer]



RIB_A_3(3GO6)
?
[Raw transfer]



RIB_A_3(3GO6)
?
[Raw transfer]



ADP_B_9(4XCK)
?
[Raw transfer]



RIB_C_11(4XCK)
?
[Raw transfer]



RIB_D_15(1GQT)
RBSK_ECOLI
[Raw transfer]



RIB_A_5(4XDA)
?
[Raw transfer]



RIB_C_11(4XDA)
?
[Raw transfer]



RIB_C_3(1RKS)
RBSK_ECOLI
[Raw transfer]



RIB_D_14(4XDA)
?
[Raw transfer]
22 PsiBlast_CBE 99.16100%-107 - C1 -3GO6 5.4 ?
21 PsiBlast_CBE 98.64100%-105 - C1 -3GO7 - ? -
61 HHSearch 97.7199%-102 - C1 -3GO6 3.4 ?
81 Fugue 97.57100% -99 - C1 -3GO6 3.4 ?
1 PsiBlast_PDB 97.57100% -99 - C1 -3GO6 - ? -
2 PsiBlast_PDB 96.08100% -96 - C1 -3GO7 - ? -
64 HHSearch 72.3335% -84 * C1 *1RKD 5.6 RBSK_ECOLI
65 HHSearch 70.9633% -85 - C1 -4XDA 3.2 ?
11 PsiBlast_PDB 70.6630% -90 * C2 *1VM7 - ? -
62 HHSearch 69.1624% -87 - C1 -2RBC - ? -
71 HHSearch 68.6930% -87 - C1 -2FV7 - RBSK_HUMAN -
63 HHSearch 68.4827% -85 - C1 -3IKH - ? -
73 HHSearch 67.8628% -83 - C1 -3RY7 - ? -
18 PsiBlast_PDB 66.3428% -88 - C1 -1TZ3 - ? -
34 PsiBlast_CBE 66.0433% -89 - C1 -4XCK 4.5 ?
80 HHSearch 65.9327% -83 - C1 -1TYY - ? -
33 PsiBlast_CBE 65.8933% -92 - C1 -4XCK 3.3 ?
16 PsiBlast_PDB 65.7428% -87 - C1 -1TZ6 - ? -
31 PsiBlast_CBE 65.2233% -90 - C1 -4XDA 5.4 ?
29 PsiBlast_CBE 65.0533% -90 - C1 -4XDA 2.5 ?
6 PsiBlast_PDB 65.0535% -88 - C1 -1GQT 5.2 RBSK_ECOLI
30 PsiBlast_CBE 64.7133% -88 - C1 -4XDA 3.5 ?
25 PsiBlast_CBE 63.9635% -88 - C1 -1RK2 5.4 RBSK_ECOLI
28 PsiBlast_CBE 63.8535% -86 - C1 -1GQT 4.7 RBSK_ECOLI
7 PsiBlast_PDB 63.8435% -85 - C1 -1RKD 4.7 RBSK_ECOLI
24 PsiBlast_CBE 63.7535% -89 - C1 -1RK2 5.4 RBSK_ECOLI
10 PsiBlast_PDB 63.6933% -88 - C1 -4XDA 4.7 ?
9 PsiBlast_PDB 63.6133% -89 - C1 -4XCK 4.6 ?
3 PsiBlast_PDB 63.6035% -88 - C1 -1RK2 5.1 RBSK_ECOLI
5 PsiBlast_PDB 63.4935% -85 - C1 -1RKS 3.3 RBSK_ECOLI
23 PsiBlast_CBE 63.2635% -87 - C1 -1RK2 5.0 RBSK_ECOLI
27 PsiBlast_CBE 63.2235% -86 - C1 -1GQT 3.7 RBSK_ECOLI
26 PsiBlast_CBE 63.0835% -87 - C1 -1GQT 3.4 RBSK_ECOLI