@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2500c: (2016-05-11 )
MTTTTTTISGGILPKEYQDLRDTVADFARTVVAPVSAKHDAEHSFPYEIVAKMGEMGLFGLPFPEEYGGMGGDYFALSLVLEELGKVDQSVAITLEAAVGLGAMPIYRFGTEEQKQKWLPDLTSGRALAGFGLTEPGAGSDAGSTRTTARLEGDEWIINGSKQFITNSGTDITSLVTVTAVTGTTGTAADAKKEISTIIVPSGTPGFTVEPVYNKVGWNASDTHPLTFADARVPRENLLGARGSGYANFLSILDEGRIAIAALATGAAQGCVDESVKYANQRQSFGQPIGAYQAIGFKIARMEARAHVARTAYYDAAAKMLAGKPFKKEAAIAKMISSEAAMDNSRDATQIHGGYGFMNEYPVARHYRDSKVLEIGEGTTEVQLMLIARSLGLQ

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]



CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



CAA_B_7(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_4(1UKW)
?
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



FDA_A_3(4N5F)
?
[Raw transfer]



FAD_B_4(2D29)
?
[Raw transfer]



FAD_B_11(3MDE)
ACADM_PIG
[Raw transfer]



COS_B_9(4L1F)
?
[Raw transfer]



FAD_K_11(1JQI)
ACADS_RAT
[Raw transfer]



FAD_B_5(1UKW)
?
[Raw transfer]



FAD_A_5(2PG0)
?
[Raw transfer]



FAD_I_9(1JQI)
ACADS_RAT
[Raw transfer]



FAD_A_9(3MDE)
ACADM_PIG
[Raw transfer]



FAD_B_7(2PG0)
?
[Raw transfer]



FAD_C_3(2DVL)
?
[Raw transfer]



FAD_B_7(3MDD)
ACADM_PIG
[Raw transfer]



FAD_A_5(3MDD)
ACADM_PIG
[Raw transfer]



FAD_D_4(2DVL)
?
[Raw transfer]



FDA_B_15(4N5F)
?
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]



UNL_A_5(3SF6)
?
[Raw transfer]



UNL_A_6(3SF6)
?
[Raw transfer]



UNL_A_9(3SF6)
?
[Raw transfer]
123 Fugue 92.9742% -69 - C2 -1BUC 4.6 ACDS_MEGEL
24 PsiBlast_CBE 92.4443% -68 - C2 -4L1F 6.6 ?
120 HHSearch 91.9943% -66 - C2 -4L1F 7.0 ?
3 PsiBlast_PDB 91.6443% -71 - C2 -1JQI 9.1 ACADS_RAT
25 PsiBlast_CBE 91.0143% -69 - C2 -1JQI 8.8 ACADS_RAT
8 PsiBlast_PDB 90.9539% -60 - C2 -1UKW 9.2 ?
36 PsiBlast_CBE 90.8942% -71 - C2 -1BUC 5.4 ACDS_MEGEL
37 PsiBlast_CBE 90.7539% -61 - C2 -1UKW 8.4 ?
2 PsiBlast_PDB 90.3643% -68 - C2 -4L1F 5.6 ?
7 PsiBlast_PDB 90.3142% -69 - C2 -1BUC 4.7 ACDS_MEGEL
33 PsiBlast_CBE 89.6642% -66 - C2 -2VIG - ACADS_HUMAN -
31 PsiBlast_CBE 89.3442% -67 - C2 -2VIG - ACADS_HUMAN -
1 PsiBlast_PDB 89.2745% -68 - C2 -4U83 - ? -
5 PsiBlast_PDB 89.0042% -65 - C2 -2VIG - ACADS_HUMAN -
22 PsiBlast_CBE 88.9245% -67 - C2 -4U83 - ? -
112 HHSearch 88.8936% -67 * C2 *2JIF - ACDSB_HUMAN -
30 PsiBlast_CBE 88.5942% -66 - C2 -2VIG - ACADS_HUMAN -
29 PsiBlast_CBE 88.4642% -67 - C2 -2VIG - ACADS_HUMAN -
114 HHSearch 88.3536% -72 - C2 -4KTO - ? -
32 PsiBlast_CBE 87.6842% -68 - C2 -2VIG - ACADS_HUMAN -
4 PsiBlast_PDB 87.3743% -69 - C2 -4N5F 9.0 ?
17 PsiBlast_PDB 86.9639% -68 - C2 -2DVL 7.9 ?
52 PsiBlast_CBE 85.5439% -67 - C2 -2DVL 8.0 ?
49 PsiBlast_CBE 85.2240% -67 - C2 -2D29 8.3 ?
16 PsiBlast_PDB 84.7540% -64 - C2 -2D29 8.7 ?
26 PsiBlast_CBE 84.4843% -70 - C2 -4N5F 7.0 ?
124 Fugue 83.7434% -68 - C2 -2Z1Q 7.8 ?
79 PsiBlast_CBE 81.8134% -63 - C2 -3MDE 7.8 ACADM_PIG
87 PsiBlast_CBE 81.6337% -69 - C2 -2PG0 8.2 ?
118 HHSearch 81.2631% -63 - C2 -3SF6 2.8 ?
81 PsiBlast_CBE 81.1134% -61 - C2 -3MDD 8.1 ACADM_PIG
78 PsiBlast_CBE 80.2034% -61 - C2 -3MDE 7.3 ACADM_PIG
86 PsiBlast_CBE 80.0937% -68 - C2 -2PG0 7.4 ?
80 PsiBlast_CBE 79.8234% -60 - C2 -3MDD 8.6 ACADM_PIG