@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2501c: (2016-05-11 )
MFDTVLVANRGEIAVRVIRTLRRLGIRSVAVYSDPDVDARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACERARVVFLGPPARAIEVMGDKIAAKNAVAAFDVPVVPGVARAGLTDDALVTAAAEVGYPVLIKPSAGGGGKGMRLVQDPARLPEALVSARREAMSSFGDDTLFLERFVLRPRHIEVQVLADAHGNVVHLGERECSLQRRHQKVIEEAPSPLLDPQTRERIGVAACNTARCVDYVGAGTVEFIVSAQRPDEFFFMEMNTRLQVEHPVTEAITGLDLVEWQLRVGAGEKLGFAQNDIELRGHAIEARVYAEDPAREFLPTGGRVLAVFEPAGPGVRVDSSLLGGTVVGSDYDPLLTKVIAHGADREEALDRLDQALARTAVLGVQTNVEFLRFLLADERVRVGDLDTAVLDERSADFTARPAPDDVLAAGGLYRQWALARRAQGDLWAAPSGWRGGGHMAPVRTAMRTPLRSETVSVWGPPESAQVQVGDGEIDCASVQVTREQMSVTISGLRRDYRWAEADRHLWIADERGTWHLREAEEHKIHRAVGARPAEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPVSGRVQVLVSVGDQVKVEQVLARIKD

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]



ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]



ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]



ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]



ADP_A_8(3OUZ)
?
[Raw transfer]



ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]



ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]



ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]



ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]



ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]



ANP_A_3(2VPQ)
?
[Raw transfer]



AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]



ANP_A_3(2VPQ)
?
[Raw transfer]



ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]



ANP_B_7(2VPQ)
?
[Raw transfer]



ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]



ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]



ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]



ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]



ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



GOL_A_5(3VA7)
?
[Raw transfer]



JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]



JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]



LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]



LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]



LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]



L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]



L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]



OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]



LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]



LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]



OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]



OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]



L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]



OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]



OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]



ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]



L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]



L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]



OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]



ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]



ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]



OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]



OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]



OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]
1 PsiBlast_PDB 86.3946% -87 - C2 -3U9S - ? -
128 HHSearch 84.5646% -85 - C2 -3U9T - ? -
2 PsiBlast_PDB 84.0746% -81 - C2 -3U9T - ? -
121 Fugue 83.9138% -67 - C2 -3VA7 2.1 ?
139 HHSearch 82.7146% -79 - C2 -2VPQ 6.8 ?
26 PsiBlast_CBE 82.3149% -92 - C2 -2C00 - ACCC_PSEAE -
119 Fugue 82.2942% -81 - C2 -3U9T - ? -
27 PsiBlast_CBE 82.2646% -81 - C2 -2VPQ 5.8 ?
5 PsiBlast_PDB 82.0949% -84 - C2 -2VQD 7.2 ACCC_PSEAE
7 PsiBlast_PDB 82.0646% -79 - C2 -2VPQ 6.8 ?
40 PsiBlast_CBE 81.6446% -84 - C2 -2W6Q 5.0 ACCC_ECOLI
61 PsiBlast_CBE 81.6346% -84 - C2 -3G8C 5.9 ACCC_ECOLI
141 HHSearch 81.6147% -87 - C2 -4MV4 4.6 ACCC_HAEIN
6 PsiBlast_PDB 81.5349% -89 - C2 -2C00 - ACCC_PSEAE -
28 PsiBlast_CBE 81.5246% -83 - C2 -3JZI 9.1 ACCC_ECOLI
140 HHSearch 81.5142% -87 - C2 -3OUZ 7.1 ?
34 PsiBlast_CBE 81.4546% -85 - C2 -2W71 6.5 ACCC_ECOLI
62 PsiBlast_CBE 81.4046% -83 - C2 -3G8C 6.2 ACCC_ECOLI
138 HHSearch 81.3942% -87 - C2 -2DZD - ? -
39 PsiBlast_CBE 81.3546% -84 - C2 -2W6Z 4.4 ACCC_ECOLI
45 PsiBlast_CBE 81.3346% -85 - C2 -2W6N 5.8 ACCC_ECOLI
29 PsiBlast_CBE 81.2546% -82 - C2 -3JZF 9.2 ACCC_ECOLI
36 PsiBlast_CBE 81.2146% -85 - C2 -2W70 3.9 ACCC_ECOLI
47 PsiBlast_CBE 81.1946% -86 - C2 -2W6M 3.7 ACCC_ECOLI
66 PsiBlast_CBE 81.0146% -86 - C2 -3G8D 5.1 ACCC_ECOLI
65 PsiBlast_CBE 80.9546% -83 - C2 -3RV4 8.2 ACCC_ECOLI
42 PsiBlast_CBE 80.8946% -83 - C2 -2W6P 4.5 ACCC_ECOLI
58 PsiBlast_CBE 80.8346% -83 - C2 -3RV3 7.8 ACCC_ECOLI
54 PsiBlast_CBE 80.8246% -86 - C2 -2V58 5.5 ACCC_ECOLI
56 PsiBlast_CBE 80.7546% -84 - C2 -2J9G 6.7 ACCC_ECOLI
57 PsiBlast_CBE 80.6846% -83 - C2 -3RV3 6.3 ACCC_ECOLI
20 PsiBlast_PDB 80.6846% -86 - C2 -2VR1 4.1 ACCC_ECOLI
10 PsiBlast_PDB 80.6846% -86 - C2 -4MV4 4.6 ACCC_HAEIN
37 PsiBlast_CBE 80.6346% -83 - C2 -2W70 3.9 ACCC_ECOLI
16 PsiBlast_PDB 80.6246% -82 - C2 -3JZI 8.6 ACCC_ECOLI
43 PsiBlast_CBE 80.6146% -88 - C2 -2W6O 3.4 ACCC_ECOLI
59 PsiBlast_CBE 80.5546% -82 - C2 -3RUP 6.9 ACCC_ECOLI
51 PsiBlast_CBE 80.5446% -83 - C2 -2V5A 5.2 ACCC_ECOLI
53 PsiBlast_CBE 80.4946% -84 - C2 -2V59 4.9 ACCC_ECOLI
52 PsiBlast_CBE 80.4946% -85 - C2 -2V59 5.3 ACCC_ECOLI
19 PsiBlast_PDB 80.4446% -85 - C2 -2J9G 5.8 ACCC_ECOLI
64 PsiBlast_CBE 80.3746% -83 - C2 -1DV2 5.2 ACCC_ECOLI
63 PsiBlast_CBE 80.3546% -80 - C2 -1DV2 3.9 ACCC_ECOLI
41 PsiBlast_CBE 80.2446% -84 - C2 -2W6Q 4.5 ACCC_ECOLI
35 PsiBlast_CBE 80.1346% -85 - C2 -2W71 6.3 ACCC_ECOLI
46 PsiBlast_CBE 80.0446% -83 - C2 -2W6N 5.7 ACCC_ECOLI
44 PsiBlast_CBE 80.0146% -86 - C2 -2W6O 4.0 ACCC_ECOLI
55 PsiBlast_CBE 79.9646% -82 - C2 -2V58 5.5 ACCC_ECOLI
48 PsiBlast_CBE 79.9646% -82 - C2 -2W6M 3.6 ACCC_ECOLI
9 PsiBlast_PDB 79.9646% -90 - C2 -4MV3 3.7 ACCC_HAEIN
60 PsiBlast_CBE 79.8246% -80 - C2 -3RUP 7.7 ACCC_ECOLI
8 PsiBlast_PDB 79.6746% -90 - C2 -4MV1 5.0 ACCC_HAEIN
11 PsiBlast_PDB 79.3546% -88 - C2 -4MV8 5.0 ACCC_HAEIN
13 PsiBlast_PDB 78.1046% -88 - C2 -4RZQ 3.4 ACCC_HAEIN
3 PsiBlast_PDB 73.6746% -86 - C2 -3VA7 2.1 ?
136 HHSearch 73.2347% -85 - C2 -3VA7 2.1 ?