@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2509: (2016-05-11 )
MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELAARLADKYRVTVDVRPADLADPQERSKLADELAARPISILCANAGTATFGPIASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDASEASLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAPRAIVAPIVGAFYKRLGGS

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_C_7(3P19)
?
[Raw transfer]



NAP_D_8(3RKU)
YM71_YEAST
[Raw transfer]



NAP_A_5(3RKU)
YM71_YEAST
[Raw transfer]



NAP_C_7(3RKU)
YM71_YEAST
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NAP_B_6(3RKU)
YM71_YEAST
[Raw transfer]



NAP_D_8(3P19)
?
[Raw transfer]



NAP_B_6(3P19)
?
[Raw transfer]



EST_A_3(1FDT)
DHB1_HUMAN
[Raw transfer]



EST_C_3(1FDW)
DHB1_HUMAN
[Raw transfer]
25 PsiBlast_CBE 85.2732% -96 - C1 -3ASV - ? -
24 PsiBlast_CBE 83.9332% -94 - C1 -3ASV - ? -
21 PsiBlast_CBE 83.4532% -95 - C1 -3ASV - ? -
81 PsiBlast_CBE 83.1132%-104 - C1 -3QRW - ACT3_STRCO -
2 PsiBlast_PDB 83.0532% -94 - C1 -3ASV - ? -
23 PsiBlast_CBE 82.7532% -90 - C1 -3ASV - ? -
22 PsiBlast_CBE 81.2932% -90 - C1 -3ASV - ? -
85 PsiBlast_CBE 81.1531%-102 - C1 -4DBZ - ACT3_STRCO -
110 HHSearch 79.3227% -81 - C1 -3AI3 - ? -
70 PsiBlast_CBE 79.0331%-101 - C1 -2RHC - ACT3_STRCO -
62 PsiBlast_CBE 78.7131%-103 - C1 -4DC0 - ACT3_STRCO -
64 PsiBlast_CBE 78.2631%-101 - C1 -4DC1 - ACT3_STRCO -
69 PsiBlast_CBE 77.7032%-105 - C1 -2RHR - ACT3_STRCO -
72 PsiBlast_CBE 77.4831%-100 - C1 -2RH4 - ACT3_STRCO -
83 PsiBlast_CBE 77.2832% -98 - C1 -3CSD - ACT3_STRCO -
80 PsiBlast_CBE 77.2832%-102 - C1 -3RI3 - ACT3_STRCO -
8 PsiBlast_PDB 77.2127% -77 - C1 -4YAG - ? -
79 PsiBlast_CBE 77.1632%-101 - C1 -3RI3 - ACT3_STRCO -
74 PsiBlast_CBE 77.0831%-104 - C1 -1XR3 - ACT3_STRCO -
77 PsiBlast_CBE 77.0431% -99 - C1 -1X7H - ACT3_STRCO -
47 PsiBlast_CBE 68.2533%-104 - C1 -3RKU 10.1 YM71_YEAST
7 PsiBlast_PDB 68.2433%-105 - C1 -3RKU 8.8 YM71_YEAST
45 PsiBlast_CBE 68.2033%-106 - C1 -3RKU 10.2 YM71_YEAST
46 PsiBlast_CBE 67.1533%-104 - C1 -3RKU 9.4 YM71_YEAST
49 PsiBlast_CBE 49.1932% -79 - C1 -3P19 11.9 ?
11 PsiBlast_PDB 48.7932% -83 - C1 -3P19 11.1 ?
50 PsiBlast_CBE 48.5632% -81 - C1 -3P19 9.7 ?
48 PsiBlast_CBE 48.1932% -83 - C1 -3P19 11.0 ?