@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2518c: (2016-05-11 )
MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MXR_B_6(3VYP)
LDT2_MYCTU
[Raw transfer]



MXR_A_4(3VYP)
LDT2_MYCTU
[Raw transfer]



MXR_A_4(3VYP)
LDT2_MYCTU
[Raw transfer]



DWZ_A_3(4GSU)
LDT2_MYCTU
[Raw transfer]



DWZ_B_4(4GSU)
LDT2_MYCTU
[Raw transfer]



DWZ_A_3(4QR7)
LDT2_MYCTU
[Raw transfer]



IM2_A_2(4JMX)
LDT1_MYCTU
[Raw transfer]



3V5_A_3(4QTF)
LDT2_MYCTU
[Raw transfer]



6CL_A_8(3TUR)
LDT2_MYCTO
[Raw transfer]



6CL_A_8(3TUR)
LDT2_MYCTO
[Raw transfer]



BME_A_4(3U1Q)
LDT2_MYCTO
[Raw transfer]



PEG_B_9(3U1Q)
LDT2_MYCTO
[Raw transfer]
5 PsiBlast_PDB 98.54100% -95 - C5 -4QTF 2.6 LDT2_MYCTU
2 PsiBlast_PDB 98.18100% -93 - C5 -4QR7 3.6 LDT2_MYCTU
1 PsiBlast_PDB 97.28100% -91 - C5 -3VYN - LDT2_MYCTU -
4 PsiBlast_PDB 95.80100% -96 - C5 -4QRB - LDT2_MYCTU -
32 HHSearch 95.20100% -98 - C5 -4QRB - LDT2_MYCTU -
21 PsiBlast_CBE 94.42100% -90 - C5 -4QRA - LDT2_MYCTU -
3 PsiBlast_PDB 94.10100% -92 - C5 -4QRA - LDT2_MYCTU -
26 PsiBlast_CBE 85.73100% -90 - C5 -4GSU 3.5 LDT2_MYCTU
16 PsiBlast_PDB 84.9199% -90 - C5 -4HUC - LDT2_MYCTU -
33 HHSearch 84.59100% -87 - C5 -3VYP 2.6 LDT2_MYCTU
14 PsiBlast_PDB 84.59100% -87 - C5 -3VYP 2.6 LDT2_MYCTU
27 PsiBlast_CBE 84.21100% -88 - C5 -3VYP 3.7 LDT2_MYCTU
13 PsiBlast_PDB 84.17100% -82 - C5 -4GSU 2.5 LDT2_MYCTU
23 PsiBlast_CBE 84.11100% -87 - C5 -3TUR - LDT2_MYCTO -
25 PsiBlast_CBE 83.8699% -87 - C5 -3U1P - LDT2_MYCTO -
24 PsiBlast_CBE 83.8699% -87 - C5 -3VAE - LDT2_MYCTO -
22 PsiBlast_CBE 83.82100% -87 - C5 -3U1Q 2.7 LDT2_MYCTO
7 PsiBlast_PDB 83.75100% -88 - C5 -3U1Q 2.9 LDT2_MYCTO
52 Fugue 83.61100% -88 - C5 -3TUR 2.3 LDT2_MYCTO
12 PsiBlast_PDB 83.57100% -89 - C5 -4GSR - LDT2_MYCTU -
6 PsiBlast_PDB 83.57100% -88 - C5 -3TUR 2.3 LDT2_MYCTO
29 PsiBlast_CBE 60.5243% -81 - C5 -4JMX 3.2 LDT1_MYCTU