@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2601: (2016-05-12 )
MTSTRQAGEATEASVRWRAVLLAAVAACAACGLVYELALLTLAASLNGGGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFLDELDGSTLVLAVGTALIGGLVGAEVPLLMTLLQRGRVAGAADAGRTLANLNAADYLGALVGGLAWPFLLLPQLGMIRGAAVTGIVNLAAAGVVSIFLLRHVVSGRQLVTALCALAAALGLIATLLVHSHDIETTGRQQLYADPIIAYRHSAYQEIVVTRRGDDLRLYLDGGLQFCTRDEYRYTESLVYPAVSDGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDPDTPVLGRLYSTEFYALAARALAPGGLMVVQAGSPYSTPTAFWRIISTIRSAGYAVTPYHVHVPTFGDWGFALARLTDIAPTPAVPSTAPALRFLDQQVLEAATVFSGDIRPRTLDPSTLDNPHIVEDMRHGWD

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4ZY_B_7(4UOE)
?
[Raw transfer]



4ZY_A_5(4UOE)
?
[Raw transfer]



4ZY_C_11(4UOE)
?
[Raw transfer]



SPD_C_6(2PWP)
?
[Raw transfer]



2MH_B_9(2PT9)
?
[Raw transfer]



4JU_B_6(4YUW)
?
[Raw transfer]



4JU_A_4(4YUW)
?
[Raw transfer]



MTA_B_4(3ANX)
SPEE_THET8
[Raw transfer]



MTA_A_3(3ANX)
SPEE_THET8
[Raw transfer]
76 HHSearch 91.0633% -97 - C1 -1UIR - SPEE_THET8 -
83 HHSearch 84.4027%-105 - C1 -2PT6 - ? -
81 HHSearch 83.1127%-102 - C1 -2I7C - ? -
84 HHSearch 79.6331%-103 - C1 -1MJF - SPEE_PYRFU -
53 PsiBlast_CBE 79.4634%-102 - C1 -2ZSU - SPEE_PYRHO -
85 HHSearch 79.3026%-104 - C1 -4YUY - ? -
55 PsiBlast_CBE 79.0934%-103 - C1 -2E5W - SPEE_PYRHO -
78 HHSearch 78.9025%-105 - C1 -1INL - SPEE_THEMA -
52 PsiBlast_CBE 78.5334%-105 - C1 -2ZSU - SPEE_PYRHO -
57 PsiBlast_CBE 78.3234%-101 - C1 -2E5W - SPEE_PYRHO -
51 PsiBlast_CBE 77.9134%-102 - C1 -2ZSU - SPEE_PYRHO -
66 Fugue 77.4428% -94 - C1 -1MJF - SPEE_PYRFU -
39 PsiBlast_CBE 77.2431% -90 - C1 -2PT6 - ? -
37 PsiBlast_CBE 77.1331% -92 * C1 *2PT9 2.2 ?
41 PsiBlast_CBE 77.1131% -96 - C1 -2PT6 - ? -
36 PsiBlast_CBE 76.5331% -91 - C1 -2PT9 - ? -
56 PsiBlast_CBE 76.4334%-110 - C1 -2E5W - SPEE_PYRHO -
80 HHSearch 75.7529% -98 - C1 -3O4F - SPEE_ECOLI -
38 PsiBlast_CBE 75.6831% -93 - C1 -2PT9 - ? -
86 HHSearch 75.6526%-111 - C1 -2B2C - ? -
1 PsiBlast_PDB 74.2338%-123 - C1 -3ANX 6.0 SPEE_THET8
21 PsiBlast_CBE 73.2138%-113 - C1 -3ANX 4.6 SPEE_THET8
48 PsiBlast_CBE 69.6032% -92 - C1 -4UOE 3.3 ?
50 PsiBlast_CBE 68.9832% -89 - C1 -4UOE 3.2 ?
49 PsiBlast_CBE 68.9432% -92 - C1 -4UOE 3.2 ?
45 PsiBlast_CBE 67.9932% -90 - C1 -2PWP 3.4 ?
34 PsiBlast_CBE 67.0431%-105 - C1 -4YUW 3.1 ?
14 PsiBlast_PDB 67.0231%-104 - C1 -4YUW 3.1 ?