@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2606c: (2016-05-12 )
MDPAGNPATGTARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIAAVTIPVMAKVRIGHFVEAQILQTLGVDYIDESEVLTPADYAHHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQRGW

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_C_6(4JDY)
PDXS_MYCTU
[Raw transfer]



GOL_A_4(4JDY)
PDXS_MYCTU
[Raw transfer]



R5P_A_8(4ADU)
PDX1_PLABE
[Raw transfer]



R5P_B_9(4ADU)
PDX1_PLABE
[Raw transfer]



GOL_B_5(4JDY)
PDXS_MYCTU
[Raw transfer]



MPD_B_8(2ZBT)
PDXS_THET8
[Raw transfer]



MPD_A_7(2ZBT)
PDXS_THET8
[Raw transfer]



MPD_C_5(2ZBT)
PDXS_THET8
[Raw transfer]



MPD_A_7(2ZBT)
PDXS_THET8
[Raw transfer]



MPD_D_6(2ZBT)
PDXS_THET8
[Raw transfer]
21 PsiBlast_CBE 97.79100%-120 - C5 -4JDY 2.8 PDXS_MYCTU
1 PsiBlast_PDB 97.35100%-120 - C5 -4JDY 2.7 PDXS_MYCTU
22 PsiBlast_CBE 96.32100%-119 - C5 -4JDY 2.8 PDXS_MYCTU
2 PsiBlast_PDB 91.9769%-118 - C5 -2ZBT 2.8 PDXS_THET8
25 PsiBlast_CBE 91.0669%-119 - C5 -2ZBT 2.7 PDXS_THET8
23 PsiBlast_CBE 90.7369%-117 - C5 -2ZBT 2.8 PDXS_THET8
24 PsiBlast_CBE 89.9569%-119 - C5 -2ZBT 2.7 PDXS_THET8
45 PsiBlast_CBE 87.9463%-122 - C5 -2NV1 - PDXS_BACSU -
47 PsiBlast_CBE 87.8663%-113 - C5 -2NV2 - PDXS_BACSU -
5 PsiBlast_PDB 87.8565%-106 - C5 -4WXY - PDXS_GEOKA -
18 PsiBlast_PDB 87.5153%-120 - C5 -4FIQ - PDXS_PYRHO -
104 HHSearch 87.3563%-120 - C5 -2NV1 - PDXS_BACSU -
7 PsiBlast_PDB 87.3563%-120 - C5 -2NV1 - PDXS_BACSU -
10 PsiBlast_PDB 87.2763%-120 - C5 -3O05 - SNZ1_YEAST -
3 PsiBlast_PDB 87.2565%-117 - C5 -4WY0 - PDXS_GEOKA -
61 PsiBlast_CBE 87.1863%-121 - C5 -3O05 - SNZ1_YEAST -
58 PsiBlast_CBE 87.1663%-124 - C5 -3O07 - SNZ1_YEAST -
44 PsiBlast_CBE 87.0863%-120 - C5 -2NV1 - PDXS_BACSU -
14 PsiBlast_PDB 86.8754%-111 - C5 -2YZR - PDXS_METJA -
12 PsiBlast_PDB 86.8463%-123 - C5 -3O07 - SNZ1_YEAST -
105 HHSearch 84.9867%-107 - C5 -2ZBT 2.8 PDXS_THET8
66 PsiBlast_CBE 84.8558%-114 - C5 -4ADU 4.0 PDX1_PLABE
16 PsiBlast_PDB 84.6558%-116 - C5 -4ADU 3.3 PDX1_PLABE