@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2701c: (2016-05-13 )
MTRPDNEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARVLLSTPRAGGAGLVVVAAAPGIADELLAALQRFNGLEPIPD

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LIP_A_4(1IMB)
IMPA1_HUMAN
[Raw transfer]




IPD_A_4(1IMA)
IMPA1_HUMAN
[Raw transfer]




IPD_A_12(1AWB)
IMPA1_HUMAN
[Raw transfer]




LIP_B_6(1IMB)
IMPA1_HUMAN
[Raw transfer]




IPD_B_6(1IMA)
IMPA1_HUMAN
[Raw transfer]




IPD_B_11(1AWB)
IMPA1_HUMAN
[Raw transfer]




2AM_A_4(5DW8)
?
[Raw transfer]




GOL_A_7(4AS4)
IMPA1_HUMAN
[Raw transfer]




GOL_B_20(4AS5)
IMPA1_MOUSE
[Raw transfer]




GOL_B_15(4AS4)
IMPA1_HUMAN
[Raw transfer]




SRT_H_8(2P3V)
BSUHB_THEMA
[Raw transfer]




GD_A_5(2HHM)
IMPA1_HUMAN
[Raw transfer]




GD_B_5(1IMB)
IMPA1_HUMAN
[Raw transfer]




GD_B_6(2HHM)
IMPA1_HUMAN
[Raw transfer]




GD_A_3(1IMA)
IMPA1_HUMAN
[Raw transfer]




EEE_C_3(2QFL)
SUHB_ECOLI
[Raw transfer]




EEE_C_3(2QFL)
SUHB_ECOLI
[Raw transfer]




PG4_A_8(3T0J)
?
[Raw transfer]




1 PsiBlast_PDB 99.31100%-127 - C3 -2Q74 - SUHB_MYCTU -
47 HHSearch 96.6298%-124 - C3 -2Q74 - SUHB_MYCTU -
51 HHSearch 70.2831% -96 - C3 -3LV0 - ? -
15 PsiBlast_PDB 68.1134%-105 - C3 -2CZI - IMPA2_HUMAN -
56 HHSearch 67.2531% -85 - C3 -2BJI - IMPA1_BOVIN -
57 HHSearch 67.1931% -90 - C3 -2QFL 2.4 SUHB_ECOLI
49 HHSearch 67.1430% -94 - C3 -5DW8 3.0 ?
52 HHSearch 66.0928%-101 - C3 -2P3N - BSUHB_THEMA -
65 HHSearch 65.2722%-100 - C3 -1KA1 - MET22_YEAST -
48 HHSearch 64.8225% -95 - C3 -4N81 - ? -
55 HHSearch 64.5232%-101 - C3 -2FVZ - IMPA2_HUMAN -
54 HHSearch 61.3222% -92 - C3 -5EQ7 - ? -
63 HHSearch 60.1821% -92 - C3 -4O7I - ? -
72 Fugue 60.0021% -90 - C3 -1QGX - MET22_YEAST -
58 HHSearch 59.8023% -93 - C3 -1VDW - ? -
62 HHSearch 59.2724% -83 - C3 -1JP4 - BPNT1_RAT -
14 PsiBlast_PDB 58.9733% -78 - C3 -3LV0 - ? -
34 PsiBlast_CBE 58.3933% -79 - C3 -3LV0 - ? -
13 PsiBlast_PDB 58.3534% -84 - C3 -2QFL 2.4 SUHB_ECOLI
70 Fugue 58.2025% -87 - C3 -1DK4 - BSUHB_METJA -
32 PsiBlast_CBE 57.3334% -80 - C3 -4AS5 3.5 IMPA1_MOUSE
5 PsiBlast_PDB 54.3133% -84 - C3 -1IMA 4.1 IMPA1_HUMAN
10 PsiBlast_PDB 54.1933% -80 - C3 -4AS4 4.0 IMPA1_HUMAN
3 PsiBlast_PDB 54.1233% -83 - C3 -2HHM 2.8 IMPA1_HUMAN
4 PsiBlast_PDB 53.9033% -85 - C3 -1AWB 3.7 IMPA1_HUMAN
6 PsiBlast_PDB 53.8933% -80 - C3 -1IMB 3.2 IMPA1_HUMAN
28 PsiBlast_CBE 53.7733% -80 - C3 -1IMB 3.1 IMPA1_HUMAN
22 PsiBlast_CBE 53.4233% -81 - C3 -2HHM 2.8 IMPA1_HUMAN
29 PsiBlast_CBE 52.9533% -82 - C3 -1IMA 4.0 IMPA1_HUMAN
24 PsiBlast_CBE 52.8033% -77 - C3 -4AS4 2.5 IMPA1_HUMAN
23 PsiBlast_CBE 52.7033% -82 - C3 -1AWB 3.6 IMPA1_HUMAN
35 PsiBlast_CBE 50.9331% -90 - C3 -2P3V 3.0 BSUHB_THEMA
12 PsiBlast_PDB 50.2035% -83 - C3 -3T0J 1.9 ?