@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2703: (2016-05-13 )
MAATKASTATDEPVKRTATKSPAASASGAKTGAKRTAAKSASGSPPAKRATKPAARSVKPASAPQDTTTSTIPKRKTRAAAKSAAAKAPSARGHATKPRAPKDAQHEAATDPEDALDSVEELDAEPDLDVEPGEDLDLDAADLNLDDLEDDVAPDADDDLDSGDDEDHEDLEAEAAVAPGQTADDDEEIAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTELSERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLDTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_I_9(4YLP)
RPOD_ECOLI
[Raw transfer]
-
NACID_I_8(5E18)
?
[Raw transfer]
-
NACID_I_9(5E17)
?
[Raw transfer]
-
NACID_R_18(4YLP)
RPOD_ECOLI
[Raw transfer]
-
NACID_H_8(4OIO)
?
[Raw transfer]
-
NACID_H_8(4Q5S)
?
[Raw transfer]
-
NACID_H_8(4G7O)
?
[Raw transfer]
-
NACID_H_8(4OIN)
?
[Raw transfer]
-
NACID_H_13(4G7Z)
?
[Raw transfer]
-
NACID_H_8(4OIP)
?
[Raw transfer]
-
NACID_H_8(4OIR)
?
[Raw transfer]
-
NACID_H_8(4G7H)
?
[Raw transfer]
-
NACID_H_8(4OIQ)
?
[Raw transfer]
-
CHAIN_H_8(4Q4Z)
?
[Raw transfer]
-
NACID_P_16(4XLS)
SIGA_THEAQ
[Raw transfer]
-
NACID_R_16(4G7H)
?
[Raw transfer]
-
NACID_R_17(4G7O)
?
[Raw transfer]
-
NACID_R_15(4G7Z)
?
[Raw transfer]
-
NACID_Q_16(4G7O)
?
[Raw transfer]
-
NACID_M_5(3N97)
SIGA_THEAQ
[Raw transfer]
-
NACID_S_18(4XLS)
SIGA_THEAQ
[Raw transfer]
-
NACID_B_1(1KU7)
SIGA_THEAQ
[Raw transfer]
-
24 PsiBlast_CBE 93.3651% -96 - C6 -4Q4Z 12.1 ?
38 PsiBlast_CBE 92.9851% -95 - C6 -4G7O 13.7 ?
40 PsiBlast_CBE 92.9751% -95 - C6 -4G7H 13.7 ?
31 PsiBlast_CBE 92.8251% -94 - C6 -4OIQ 13.8 ?
34 PsiBlast_CBE 92.7851% -97 - C6 -4OIN 13.0 ?
36 PsiBlast_CBE 92.6851% -94 - C6 -4G7Z 11.8 ?
32 PsiBlast_CBE 92.5851% -93 - C6 -4OIP 14.3 ?
30 PsiBlast_CBE 92.5251% -95 - C6 -4OIR 12.6 ?
33 PsiBlast_CBE 92.1751% -98 - C6 -4OIO 13.2 ?
39 PsiBlast_CBE 91.2151% -92 - C6 -4G7H 13.6 ?
37 PsiBlast_CBE 90.7951% -92 - C6 -4G7O 13.8 ?
29 PsiBlast_CBE 90.3351% -94 - C6 -5E17 3.8 ?
35 PsiBlast_CBE 90.1351% -91 - C6 -4G7Z 11.7 ?
28 PsiBlast_CBE 89.7351% -97 - C6 -5E18 3.4 ?
20 PsiBlast_PDB 88.8851% -93 - C6 -4Q5S 16.2 ?
23 PsiBlast_CBE 88.5449% -99 - C6 -4XLN - SIGA_THEAQ -
4 PsiBlast_PDB 88.4749% -97 - C6 -4XLP - SIGA_THEAQ -
5 PsiBlast_PDB 87.9649% -92 - C6 -4XLQ - SIGA_THEAQ -
3 PsiBlast_PDB 87.8149% -97 - C6 -4XLN - SIGA_THEAQ -
21 PsiBlast_CBE 87.6649% -98 - C6 -4XLS 4.0 SIGA_THEAQ
7 PsiBlast_PDB 87.1149%-100 - C6 -4XLS 4.0 SIGA_THEAQ
46 PsiBlast_CBE 78.6460% -95 - C6 -4YLP 3.3 RPOD_ECOLI
47 PsiBlast_CBE 77.8060% -93 - C6 -4YLP 3.4 RPOD_ECOLI
60 PsiBlast_CBE 44.8154% 10 - C6 -1KU7 3.5 SIGA_THEAQ
59 PsiBlast_CBE 40.3959% 34 - C6 -3N97 3.4 SIGA_THEAQ