@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2713: (2016-05-13 )
MREYDIVVIGSGPGGQKAAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTLREAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQTKVDHIYAVGDVIGFPALAATSMEQGRLAAYHAFGEPTDGITELQPIGIYSIPEVSYVGATEVELTKSSIPYEVGVARYRELARGQIAGDSYGMLKLLVSTEDLKLLGVHIFGTSATEMVHIGQAVMGCGGSVEYLVDAVFNYPTFSEAYKNAALDVMNKMRALNQFRR

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_7(2YQU)
?
[Raw transfer]




FAD_B_6(2EQ7)
?
[Raw transfer]




FAD_B_8(2YQU)
?
[Raw transfer]




FAD_A_7(2YQU)
?
[Raw transfer]




FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]




FAD_A_4(2EQ7)
?
[Raw transfer]




FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_C_3(1OJT)
?
[Raw transfer]




FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]




FAD_C_3(1BHY)
?
[Raw transfer]




FAD_B_11(4JDR)
DLDH_ECOLI
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_A_3(4JDR)
DLDH_ECOLI
[Raw transfer]




FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




113 HHSearch 93.2935%-103 - C2 -2YQU 11.4 ?
103 HHSearch 93.2436%-106 - C2 -3URH - ? -
22 PsiBlast_CBE 93.0435%-100 - C2 -2EQ7 11.9 ?
2 PsiBlast_PDB 92.4835%-102 - C2 -2YQU 11.4 ?
1 PsiBlast_PDB 91.7535%-101 - C2 -2EQ7 12.3 ?
99 HHSearch 91.6832% -99 - C2 -2QAE 11.4 DLDH_TRYCR
67 PsiBlast_CBE 91.5333%-105 - C2 -1EBD 11.5 DLDH1_GEOSE
21 PsiBlast_CBE 91.4435%-101 - C2 -2YQU 11.3 ?
64 PsiBlast_CBE 91.4032%-103 - C2 -4JQ9 - ? -
106 HHSearch 90.4333%-103 - C2 -3LAD 11.7 DLDH_AZOVI
6 PsiBlast_PDB 90.2432%-104 - C2 -3LAD 11.7 DLDH_AZOVI
16 PsiBlast_PDB 90.2133%-105 - C2 -1EBD 11.5 DLDH1_GEOSE
27 PsiBlast_CBE 89.9232%-103 - C2 -3LAD 12.4 DLDH_AZOVI
108 HHSearch 89.7132%-100 * C2 *2EQ6 - ? -
100 HHSearch 89.4630%-100 - C2 -4JQ9 - ? -
114 HHSearch 89.4532% -97 - C2 -1ZMD - DLDH_HUMAN -
44 PsiBlast_CBE 89.4431% -97 - C2 -2F5Z - DLDH_HUMAN -
112 HHSearch 89.4133%-103 - C2 -1DXL - DLDH_PEA -
14 PsiBlast_PDB 89.3332%-103 - C2 -4JDR 12.5 DLDH_ECOLI
61 PsiBlast_CBE 89.2332%-103 - C2 -4JQ9 - ? -
66 PsiBlast_CBE 88.2832%-102 - C2 -4JDR 12.4 DLDH_ECOLI
4 PsiBlast_PDB 87.6833% -95 - C2 -1LPF 10.9 DLDH_PSEFL
17 PsiBlast_PDB 86.4231%-100 - C2 -2QAE 9.4 DLDH_TRYCR
26 PsiBlast_CBE 86.1433% -95 - C2 -1LPF 11.2 DLDH_PSEFL
68 PsiBlast_CBE 85.5731% -99 - C2 -2QAE 9.5 DLDH_TRYCR
87 PsiBlast_CBE 72.1532% -96 - C2 -1OJT 10.3 ?
86 PsiBlast_CBE 71.9332% -97 - C2 -1BHY 10.1 ?