@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2724c: (2016-05-13 )
MGSATKYQRTLFEPEHELFRESYRAFLDRHVAPYHDEWEKTKIVDRGVWLEAGKQGFLGMAVPEEYGGGGNADFRYNTVITEETCAGRYSGIGFGLHNDIVAPYLLALATEEQKRRWFPNFCTGELITAIAMTEPGTGSDLQGITTRAVKHGDHYVLNGSKTFITNGINSDLVIVVAQTDPEKGAQGFSLLVVERGMAGFERGRQLDKIGLDAQDTAELSFTDVAVPAENLLGQEGMGFIYLMQNLPQERISIAIMAAAGMESVLEQTLQYAKERKAFGRSIGSFQNSRFLLAELATEATVVRIMVDEFIKLHLAGKLTAEQAAMAKWYATEKQVYLNDRCLQLHGGYGYMREYPVARAYLDSRVQTIYGGTTEIMKEIIGRGLGV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_8(4L1F)
?
[Raw transfer]



FDA_A_20(3OIB)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_B_7(2PG0)
?
[Raw transfer]



FAD_B_4(2D29)
?
[Raw transfer]



FAO_A_4(3P4T)
?
[Raw transfer]



FAD_A_3(4L1F)
?
[Raw transfer]



FAD_A_5(2PG0)
?
[Raw transfer]



FAD_A_3(4L1F)
?
[Raw transfer]



FAO_B_5(3P4T)
?
[Raw transfer]



UNL_A_5(3SF6)
?
[Raw transfer]



UNL_A_9(3SF6)
?
[Raw transfer]
1 PsiBlast_PDB 97.1553% -93 - C1 -2PG0 - ? -
90 HHSearch 97.0952% -91 - C1 -2PG0 9.3 ?
21 PsiBlast_CBE 96.4653% -93 - C1 -2PG0 8.7 ?
104 HHSearch 90.3637% -80 - C1 -4L1F 9.2 ?
25 PsiBlast_CBE 90.0237% -76 - C1 -4L1F 7.2 ?
3 PsiBlast_PDB 89.8137% -78 - C1 -4L1F 9.2 ?
24 PsiBlast_CBE 88.0538% -83 - C1 -3R7K - ? -
87 HHSearch 87.8333% -84 - C1 -1RX0 - ACAD8_HUMAN -
44 PsiBlast_CBE 87.3633% -82 - C1 -1RX0 - ACAD8_HUMAN -
45 PsiBlast_CBE 87.1133% -83 - C1 -1RX0 - ACAD8_HUMAN -
60 PsiBlast_CBE 86.6036% -76 - C1 -2D29 8.8 ?
97 HHSearch 86.5634% -82 * C1 *1IVH - IVD_HUMAN -
41 PsiBlast_CBE 86.5634% -86 - C1 -4M9A - ? -
23 PsiBlast_CBE 86.5438% -82 - C1 -3R7K - ? -
59 PsiBlast_CBE 86.4436% -78 - C1 -2D29 9.0 ?
15 PsiBlast_PDB 86.3433% -82 - C1 -1RX0 - ACAD8_HUMAN -
12 PsiBlast_PDB 86.1934% -84 - C1 -4M9A - ? -
10 PsiBlast_PDB 86.1333% -77 - C1 -1JQI - ACADS_RAT -
19 PsiBlast_PDB 86.1236% -75 - C1 -1WS9 - ? -
43 PsiBlast_CBE 86.1133% -80 - C1 -1RX0 - ACAD8_HUMAN -
9 PsiBlast_PDB 85.3338% -83 - C1 -3P4T 8.9 ?
36 PsiBlast_CBE 84.5338% -85 - C1 -3P4T 3.9 ?
8 PsiBlast_PDB 84.2538% -83 - C1 -3OIB 3.8 ?