@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2737c: (2016-05-13 )
MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAATLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRISGMDNVTAFAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]




DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]




ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]




DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]




DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]




SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]




ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]




ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]




SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]




ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]




ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]




AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]




ADP_A_6(1XMV)
RECA_ECOLI
[Raw transfer]




ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]




ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]




GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]




GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]




29 PsiBlast_PDB 93.05100% -86 - C2 -1MO3 5.6 RECA_MYCTU
28 PsiBlast_PDB 92.23100% -92 - C2 -1G18 4.4 RECA_MYCTU
34 PsiBlast_PDB 92.20100% -83 - C2 -4PR0 2.3 RECA_MYCTU
31 PsiBlast_PDB 92.17100% -80 - C2 -1MO5 4.8 RECA_MYCTU
145 Fugue 92.0395% -80 - C2 -1G19 - RECA_MYCTU -
33 PsiBlast_PDB 91.83100% -87 - C2 -4PQY 2.3 RECA_MYCTU
30 PsiBlast_PDB 91.67100% -80 - C2 -1MO4 5.6 RECA_MYCTU
32 PsiBlast_PDB 91.65100% -89 - C2 -1MO6 6.0 RECA_MYCTU
55 PsiBlast_CBE 90.5692% -86 - C2 -2ZRD 5.3 RECA_MYCS2
49 PsiBlast_CBE 90.4092% -88 - C2 -2ZRO 6.3 RECA_MYCS2
56 PsiBlast_CBE 90.2592% -84 - C2 -2ZRC - RECA_MYCS2 -
58 PsiBlast_CBE 89.9192% -86 - C2 -2ZRK 7.2 RECA_MYCS2
59 PsiBlast_CBE 89.8692% -87 - C2 -2ZRJ 5.9 RECA_MYCS2
54 PsiBlast_CBE 89.7892% -89 - C2 -2ZRE 5.9 RECA_MYCS2
60 PsiBlast_CBE 89.6892% -89 - C2 -2ZRH - RECA_MYCS2 -
53 PsiBlast_CBE 89.6592% -92 - C2 -2ZRF 6.2 RECA_MYCS2
47 PsiBlast_PDB 89.6092% -85 - C2 -2ZRM 5.5 RECA_MYCS2
51 PsiBlast_CBE 89.5792% -86 - C2 -2ZR0 - RECA_MYCS2 -
42 PsiBlast_PDB 89.0592% -82 - C2 -2OE2 - RECA_MYCS2 -
143 Fugue 88.9479% -69 * C4 *1G19 - RECA_MYCTU -
50 PsiBlast_CBE 87.6092% -89 - C2 -2ZRA 4.9 RECA_MYCS2
38 PsiBlast_PDB 87.2292% -81 - C2 -1UBG 6.0 RECA_MYCS2
48 PsiBlast_CBE 86.8492% -89 - C2 -2ZRP 5.3 RECA_MYCS2
52 PsiBlast_CBE 86.8392% -87 - C2 -2ZRG 5.4 RECA_MYCS2
40 PsiBlast_PDB 86.6792% -81 - C2 -2ODN 7.5 RECA_MYCS2
43 PsiBlast_PDB 86.4492% -84 - C2 -2OEP 6.8 RECA_MYCS2
57 PsiBlast_CBE 86.2492% -83 - C2 -2ZRL 4.1 RECA_MYCS2
36 PsiBlast_PDB 86.1792% -89 - C2 -1UBE 5.0 RECA_MYCS2
39 PsiBlast_PDB 85.9992% -87 - C2 -2G88 7.5 RECA_MYCS2
41 PsiBlast_PDB 85.7592% -88 - C2 -2ODW 4.8 RECA_MYCS2
37 PsiBlast_PDB 84.9892% -84 - C2 -1UBF 6.1 RECA_MYCS2
64 PsiBlast_CBE 76.7565% -80 - C2 -1XMS 6.1 RECA_ECOLI
63 PsiBlast_CBE 76.7165% -83 - C2 -1XMV 6.7 RECA_ECOLI