@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2750: (2016-05-13 )
MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGIAMMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPMINNEFFQQWLTTADMDAPHNLGNALPVELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_6(3T7C)
?
[Raw transfer]



NAD_A_3(4RGB)
?
[Raw transfer]



NAD_C_7(3T7C)
?
[Raw transfer]



NAD_A_3(4RGB)
?
[Raw transfer]



NAD_C_12(3UVE)
?
[Raw transfer]



NAD_B_4(4RGB)
?
[Raw transfer]



NAD_B_6(3PGX)
Y4146_MYCPA
[Raw transfer]



NAD_C_7(3TSC)
?
[Raw transfer]



NAD_D_13(5EJ2)
?
[Raw transfer]



NAD_A_5(3T7C)
?
[Raw transfer]



NAD_B_8(3UVE)
?
[Raw transfer]



NAD_D_8(3T7C)
?
[Raw transfer]



NAD_C_7(3PGX)
Y4146_MYCPA
[Raw transfer]



NAD_D_15(3UVE)
?
[Raw transfer]



NAD_A_5(3PGX)
Y4146_MYCPA
[Raw transfer]



NAD_C_10(5EJ2)
?
[Raw transfer]



NAD_B_8(5EJ2)
?
[Raw transfer]



NAD_A_5(3UVE)
?
[Raw transfer]



NAD_D_10(3TSC)
?
[Raw transfer]



NAD_A_5(5EJ2)
?
[Raw transfer]



NAD_A_5(3TSC)
?
[Raw transfer]



NAD_D_8(3PGX)
Y4146_MYCPA
[Raw transfer]



NAD_B_6(3TSC)
?
[Raw transfer]



NAD_A_5(3TSC)
?
[Raw transfer]



1PS_B_6(4URE)
?
[Raw transfer]



PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]
25 PsiBlast_CBE 92.8076%-116 - C1 -3SX2 - ? -
23 PsiBlast_CBE 92.1576%-115 - C1 -3SX2 - ? -
1 PsiBlast_PDB 91.5776%-115 - C1 -3SX2 - ? -
110 HHSearch 90.7175%-111 - C1 -3SX2 - ? -
22 PsiBlast_CBE 90.3376%-115 - C1 -3SX2 - ? -
24 PsiBlast_CBE 88.0476%-114 - C1 -3SX2 - ? -
21 PsiBlast_CBE 86.0376%-118 - C1 -3SX2 - ? -
2 PsiBlast_PDB 80.7850%-116 - C1 -5EJ2 12.5 ?
28 PsiBlast_CBE 80.3050%-114 - C1 -5EJ2 12.7 ?
26 PsiBlast_CBE 79.1850%-114 - C1 -5EJ2 12.1 ?
27 PsiBlast_CBE 78.7650%-113 - C1 -5EJ2 12.5 ?
32 PsiBlast_CBE 77.7648%-114 - C1 -3UVE 12.3 ?
31 PsiBlast_CBE 77.5748%-112 - C1 -3UVE 12.5 ?
4 PsiBlast_PDB 77.4748%-112 - C1 -3UVE 12.7 ?
33 PsiBlast_CBE 76.8548%-113 - C1 -3UVE 12.5 ?
30 PsiBlast_CBE 74.8246%-109 - C1 -3OEC - ? -
3 PsiBlast_PDB 73.6146%-110 - C1 -3OEC - ? -
29 PsiBlast_CBE 72.9646%-111 - C1 -3OEC - ? -
6 PsiBlast_PDB 71.6450%-106 - C1 -3TSC 13.1 ?
38 PsiBlast_CBE 71.5050%-108 - C1 -3TSC 12.8 ?
107 HHSearch 71.4548%-107 - C1 -3TSC 13.1 ?
37 PsiBlast_CBE 71.4450%-106 - C1 -3TSC 12.7 ?
5 PsiBlast_PDB 71.4448%-108 - C1 -3T7C 11.9 ?
39 PsiBlast_CBE 71.2650%-109 - C1 -3TSC 12.7 ?
8 PsiBlast_PDB 70.9841%-108 - C1 -4RGB 12.0 ?
36 PsiBlast_CBE 70.8148%-106 - C1 -3T7C 11.6 ?
35 PsiBlast_CBE 70.5848%-106 - C1 -3T7C 11.6 ?
34 PsiBlast_CBE 70.2848%-107 - C1 -3T7C 11.7 ?
43 PsiBlast_CBE 69.9241%-108 - C1 -4RGB 12.2 ?
106 HHSearch 68.6140%-102 - C1 -4RGB 12.0 ?
40 PsiBlast_CBE 68.2245%-107 - C1 -3PGX 13.1 Y4146_MYCPA
7 PsiBlast_PDB 67.6145%-106 - C1 -3PGX 13.0 Y4146_MYCPA
41 PsiBlast_CBE 67.0645%-107 - C1 -3PGX 13.0 Y4146_MYCPA
42 PsiBlast_CBE 67.0045%-105 - C1 -3PGX 12.9 Y4146_MYCPA
52 PsiBlast_CBE 62.4636%-104 - C1 -4URE 3.6 ?
95 PsiBlast_CBE 61.4634%-114 - C1 -4I08 2.9 FABG_VIBCH
13 PsiBlast_PDB 57.2335%-105 - C1 -3OSU 2.4 FABG_STAAM