@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2753c: (2016-05-13 )
MTTVGFDVAARLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVKDAKADLHSGAQIMADTGLAYYSGDDALNLPWLAMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCNAMSRLGGVTLSKAGLRLQGIDVGDPRLPQVAATPEQIDALAADMRAASVLR

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(3DI0)
DAPA_STAAC
[Raw transfer]




GOL_D_10(4I7U)
DAPA_AGRFC
[Raw transfer]




GOL_C_14(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_D_17(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_A_9(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_B_4(3DI0)
DAPA_STAAC
[Raw transfer]




GOL_B_12(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_B_8(4ICN)
?
[Raw transfer]




GOL_A_4(4ICN)
?
[Raw transfer]




OXM_B_6(3UQN)
?
[Raw transfer]




GOL_B_8(3TAK)
?
[Raw transfer]




GOL_A_3(3TAK)
?
[Raw transfer]




GOL_A_3(3TAK)
?
[Raw transfer]




OXM_A_4(3UQN)
?
[Raw transfer]




GOL_D_11(4I7U)
DAPA_AGRFC
[Raw transfer]




GOL_A_11(3FLU)
DAPA_NEIMB
[Raw transfer]




GOL_B_10(3PUL)
?
[Raw transfer]




GOL_B_11(3VFL)
?
[Raw transfer]




PYR_A_3(3DI1)
DAPA_STAAC
[Raw transfer]




2KT_A_3(3TDF)
?
[Raw transfer]




PYR_B_4(3DI1)
DAPA_STAAC
[Raw transfer]




2KT_B_4(3TDF)
?
[Raw transfer]




3OH_B_4(3S8H)
DAPA_PSEAE
[Raw transfer]




3OH_A_3(3S8H)
DAPA_PSEAE
[Raw transfer]




GOL_B_8(3PUD)
?
[Raw transfer]




MES_A_8(3VFL)
?
[Raw transfer]




PYR_A_3(3RK8)
?
[Raw transfer]




PYR_B_11(3RK8)
?
[Raw transfer]




LYS_B_5(3PUE)
?
[Raw transfer]




EDO_A_6(3SI9)
DAPA_BARHE
[Raw transfer]




LYS_B_7(4PFM)
?
[Raw transfer]




1 PsiBlast_PDB 97.9999%-109 - C3 -1XXX - DAPA_MYCTU -
21 PsiBlast_CBE 97.6099%-107 - C3 -1XXX - DAPA_MYCTU -
25 PsiBlast_CBE 97.5799%-109 - C3 -1XXX - DAPA_MYCTU -
24 PsiBlast_CBE 97.4999%-109 - C3 -1XXX - DAPA_MYCTU -
23 PsiBlast_CBE 97.2999%-110 - C3 -1XXX - DAPA_MYCTU -
27 PsiBlast_CBE 97.1499%-108 - C3 -1XXX - DAPA_MYCTU -
22 PsiBlast_CBE 97.1199%-108 - C3 -1XXX - DAPA_MYCTU -
26 PsiBlast_CBE 96.5899%-107 - C3 -1XXX - DAPA_MYCTU -
117 HHSearch 83.4357%-109 - C3 -3CPR - DAPA_CORGL -
2 PsiBlast_PDB 83.1558%-111 - C3 -3CPR - DAPA_CORGL -
29 PsiBlast_CBE 73.3240%-103 - C3 -1XKY - ? -
4 PsiBlast_PDB 73.0840%-104 - C3 -1XL9 - ? -
3 PsiBlast_PDB 72.7640%-102 - C3 -1XKY - ? -
116 HHSearch 72.3140%-101 - C3 -1XKY - ? -
30 PsiBlast_CBE 72.1840%-104 - C3 -1XKY - ? -
28 PsiBlast_CBE 72.0140%-102 - C3 -1XKY - ? -
93 PsiBlast_CBE 70.1133%-100 - C3 -3G0S - DAPA_SALTY -
92 PsiBlast_CBE 69.8833%-102 - C3 -3G0S - DAPA_SALTY -
137 HHSearch 69.7835%-102 - C3 -2YXG - DAPA_METJA -
132 HHSearch 68.8433% -99 - C3 -2EHH - DAPA_AQUAE -
73 PsiBlast_CBE 67.2636% -98 - C3 -3S8H 2.5 DAPA_PSEAE
81 PsiBlast_CBE 66.1634% -97 - C3 -4ICN 2.9 ?
72 PsiBlast_CBE 65.7636% -94 - C3 -3S8H 3.4 DAPA_PSEAE
80 PsiBlast_CBE 65.7034% -97 - C3 -4ICN 3.4 ?
122 HHSearch 65.5334% -99 - C3 -4PFM 3.4 ?
44 PsiBlast_CBE 65.4141%-107 - C3 -4I7U 2.1 DAPA_AGRFC
129 HHSearch 64.7435% -92 - C3 -3FLU 2.5 DAPA_NEIMB
60 PsiBlast_CBE 64.4936%-102 - C3 -3PUL 2.9 ?
126 HHSearch 64.4734% -94 - C3 -3TAK 2.3 ?
124 HHSearch 63.5933% -95 - C3 -3SI9 2.2 DAPA_BARHE
31 PsiBlast_CBE 63.5238% -99 - C3 -3VFL 2.2 ?
17 PsiBlast_PDB 63.3936%-100 - C3 -3RK8 2.2 ?
62 PsiBlast_CBE 63.0436%-101 - C3 -3PUD 2.3 ?
5 PsiBlast_PDB 62.9638%-100 - C3 -3VFL 2.1 ?
18 PsiBlast_PDB 62.3736% -99 - C3 -3TAK 2.3 ?
58 PsiBlast_CBE 62.3436% -99 - C3 -3TAK 2.3 ?
53 PsiBlast_CBE 62.0636%-100 - C3 -3UQN 3.3 ?
61 PsiBlast_CBE 61.9236%-102 - C3 -3PUE 3.0 ?
59 PsiBlast_CBE 61.7736% -97 - C3 -3RK8 2.5 ?
52 PsiBlast_CBE 61.5936% -99 - C3 -3UQN 3.2 ?
20 PsiBlast_PDB 61.4436% -97 - C3 -3TDF 3.1 ?
56 PsiBlast_CBE 61.3736% -99 - C3 -3TDF 2.9 ?
64 PsiBlast_CBE 59.3639%-106 - C3 -3DI1 3.3 DAPA_STAAC
65 PsiBlast_CBE 58.1839%-103 - C3 -3DI0 3.0 DAPA_STAAC
66 PsiBlast_CBE 57.3339%-106 - C3 -3DI0 3.5 DAPA_STAAC
63 PsiBlast_CBE 56.6639%-101 - C3 -3DI1 3.1 DAPA_STAAC
68 PsiBlast_CBE 56.4640%-102 - C3 -3DAQ 3.0 DAPA_STAAR
67 PsiBlast_CBE 56.0740%-101 - C3 -3DAQ 2.4 DAPA_STAAR
69 PsiBlast_CBE 56.0440%-100 - C3 -3DAQ 2.2 DAPA_STAAR
70 PsiBlast_CBE 55.9940%-102 - C3 -3DAQ 2.0 DAPA_STAAR