@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2780: (2016-05-13 )
MRVGIPTETKNNEFRVAITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQGGRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEGALLSERVATDLGVPFTEPASVLA

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_3(2VHZ)
DHA_MYCTU
[Raw transfer]



NAI_B_4(2VHZ)
DHA_MYCTU
[Raw transfer]



NAD_A_4(2VOJ)
DHA_MYCTU
[Raw transfer]



NAI_B_4(2VHV)
DHA_MYCTU
[Raw transfer]



NAD_E_8(2VOJ)
DHA_MYCTU
[Raw transfer]



NAD_C_6(2VOJ)
DHA_MYCTU
[Raw transfer]



NAI_A_3(2VHV)
DHA_MYCTU
[Raw transfer]



NAD_G_7(1PJC)
?
[Raw transfer]



NAD_G_7(1PJC)
?
[Raw transfer]



NAD_G_7(1PJC)
?
[Raw transfer]



NAD_G_7(1PJC)
?
[Raw transfer]



NAD_G_7(1PJC)
?
[Raw transfer]



6MD_A_2(4LMP)
?
[Raw transfer]



6MD_A_2(4LMP)
?
[Raw transfer]



GOL_B_6(1PTJ)
PNTAA_RHORT
[Raw transfer]



GOL_B_7(1NM5)
PNTAA_RHORT
[Raw transfer]



PYR_A_7(1SAY)
?
[Raw transfer]
29 PsiBlast_CBE 95.59100%-115 - C5 -2VHW - DHA_MYCTU -
119 HHSearch 95.21100%-112 - C5 -4LMP 6.1 ?
3 PsiBlast_PDB 95.21100%-112 - C5 -4LMP 6.1 ?
28 PsiBlast_CBE 95.07100%-115 - C5 -2VHW - DHA_MYCTU -
30 PsiBlast_CBE 95.04100%-114 - C5 -2VHW - DHA_MYCTU -
4 PsiBlast_PDB 94.88100%-116 - C5 -2VHW - DHA_MYCTU -
1 PsiBlast_PDB 94.71100%-112 - C5 -2VOE - DHA_MYCTU -
5 PsiBlast_PDB 94.39100%-115 - C5 -2VHX - DHA_MYCTU -
23 PsiBlast_CBE 94.03100%-109 - C5 -2VHZ 11.6 DHA_MYCTU
6 PsiBlast_PDB 93.79100%-109 - C5 -2VHZ 11.8 DHA_MYCTU
27 PsiBlast_CBE 93.42100%-109 - C5 -2VHW - DHA_MYCTU -
31 PsiBlast_CBE 93.2699%-110 - C5 -2VHV 11.1 DHA_MYCTU
22 PsiBlast_CBE 93.05100%-108 - C5 -2VOJ 11.5 DHA_MYCTU
26 PsiBlast_CBE 93.04100%-108 - C5 -2VHW - DHA_MYCTU -
24 PsiBlast_CBE 92.96100%-110 - C5 -2VHX - DHA_MYCTU -
25 PsiBlast_CBE 92.95100%-109 - C5 -2VHX - DHA_MYCTU -
7 PsiBlast_PDB 92.7899%-110 - C5 -2VHV 11.3 DHA_MYCTU
21 PsiBlast_CBE 92.67100%-108 - C5 -2VOJ 10.6 DHA_MYCTU
2 PsiBlast_PDB 92.23100%-108 - C5 -2VOJ 5.9 DHA_MYCTU
120 HHSearch 79.5949%-113 - C5 -1PJC 9.8 ?
139 Fugue 78.9548%-113 - C5 -1PJC 9.8 ?
11 PsiBlast_PDB 77.7250%-112 - C5 -1PJC 9.8 ?
10 PsiBlast_PDB 77.5250%-109 - C5 -1SAY 3.7 ?
144 Fugue 59.6552%-130 - C5 -1PJC 9.2 ?
142 Fugue 59.6552%-130 - C5 -1PJC 9.2 ?
34 PsiBlast_CBE 56.6531% -98 - C5 -1PTJ 3.0 PNTAA_RHORT
35 PsiBlast_CBE 56.5431% -99 - C5 -1NM5 2.8 PNTAA_RHORT