@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2781c: (2016-05-13 )
MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADRLADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVSITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGYPEVHQMTKPIRAAAVQADDPHGTNLWAGSAHRKTRPGPAADIIASLTPDVCSA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(4QIS)
?
[Raw transfer]



FMN_B_5(4QIT)
?
[Raw transfer]



FMN_B_4(4QIS)
?
[Raw transfer]



FMN_A_3(4QIT)
?
[Raw transfer]



FMN_B_5(4QIU)
?
[Raw transfer]



FMN_A_3(4QIU)
?
[Raw transfer]



FMN_A_3(4QIT)
?
[Raw transfer]



FMN_B_4(4Q4K)
?
[Raw transfer]



FMN_A_3(4Q4K)
?
[Raw transfer]
53 HHSearch 87.6736% -76 - C1 -4QIT 9.2 ?
23 PsiBlast_CBE 84.7939% -74 - C1 -4QIT 9.2 ?
2 PsiBlast_PDB 84.7239% -74 - C1 -4Q4K 10.1 ?
1 PsiBlast_PDB 84.1739% -75 - C1 -4QIS 9.2 ?
24 PsiBlast_CBE 83.9439% -75 - C1 -4QIU 9.5 ?
4 PsiBlast_PDB 83.9439% -73 - C1 -4QIU 9.4 ?
21 PsiBlast_CBE 83.9239% -73 - C1 -4QIS 9.4 ?
22 PsiBlast_CBE 83.9039% -73 - C1 -4Q4K 9.9 ?
3 PsiBlast_PDB 83.8339% -75 - C1 -4QIT 9.2 ?
54 HHSearch 75.3729% -85 * C1 *4IQL - ? -
57 HHSearch 73.6028% -88 - C1 -3BO9 - ? -
55 HHSearch 72.3126% -83 - C1 -2Z6I - ? -
56 HHSearch 69.7923% -85 - C1 -2GJL - 2NPD_PSEAE -
77 Fugue 69.1622% -83 - C1 -2GJL - 2NPD_PSEAE -
5 PsiBlast_PDB 64.7526% -80 - C1 -3BO9 - ? -
6 PsiBlast_PDB 58.7427% -89 - C1 -2Z6J - ? -
59 HHSearch 56.8823% -77 - C1 -4CW5 - ? -
76 HHSearch 56.6921%-117 - C1 -1P0K - IDI2_BACSU -
71 HHSearch 55.9522% -88 - C1 -2NLI - ? -
74 HHSearch 54.7418% -95 - C1 -3R2G - ? -