@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2793c: (2016-05-13 )
MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAERPALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]



BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]



NACID_E_5(3LWO)
TRUB_PYRFU
[Raw transfer]
-
NACID_F_6(3HAY)
TRUB_PYRFU
[Raw transfer]
-
NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]
-
NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]
-
NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]
-
CHAIN_E_5(3LWP)
TRUB_PYRFU
[Raw transfer]
-
NACID_F_5(3HAX)
TRUB_PYRFU
[Raw transfer]
-
CHAIN_E_5(3LWQ)
TRUB_PYRFU
[Raw transfer]
-
NACID_D_2(1ZE2)
TRUB_THEMA
[Raw transfer]
-
NACID_B_1(2AB4)
TRUB_THEMA
[Raw transfer]
-
NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]
-
NACID_C_1(1ZE2)
TRUB_THEMA
[Raw transfer]
-
NACID_B_1(1ZL3)
TRUB_ECOLI
[Raw transfer]
-
NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]
-
CHAIN_D_1(2RFK)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3LWV)
TRUB_PYRFU
[Raw transfer]
-
NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]
-
NACID_E_5(3LWR)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3HJY)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3HJW)
TRUB_PYRFU
[Raw transfer]
-
1 PsiBlast_PDB 98.42100%-125 - C6 -1SGV - TRUB_MYCTU -
29 HHSearch 96.7595%-122 - C6 -1SGV - TRUB_MYCTU -
51 Fugue 91.7088%-112 - C6 -1SGV - TRUB_MYCTU -
32 HHSearch 75.6332%-103 * C6 *2APO - TRUB_METJA -
34 HHSearch 75.4334%-124 - C6 -2AUS - TRUB_PYRAB -
31 HHSearch 74.4734% -92 - C6 -1R3E 11.1 TRUB_THEMA
30 HHSearch 74.3133% -86 - C6 -1K8W 10.4 TRUB_ECOLI
52 Fugue 73.8632% -85 - C6 -1R3E 11.2 TRUB_THEMA
50 Fugue 73.5134% -86 - C6 -1K8W 9.4 TRUB_ECOLI
5 PsiBlast_PDB 72.0434% -87 - C6 -1R3E 11.1 TRUB_THEMA
7 PsiBlast_PDB 71.5534% -95 - C6 -1ZE2 11.9 TRUB_THEMA
23 PsiBlast_CBE 70.3634% -83 - C6 -1ZE1 - TRUB_THEMA -
6 PsiBlast_PDB 70.1134% -84 - C6 -1ZE1 - TRUB_THEMA -
4 PsiBlast_PDB 69.9942% -82 - C6 -1ZL3 12.3 TRUB_ECOLI
33 HHSearch 69.4628%-100 - C6 -3U28 - CBF5_YEAST -
8 PsiBlast_PDB 69.2033% -84 - C6 -2AB4 10.7 TRUB_THEMA
2 PsiBlast_PDB 69.1442% -85 - C6 -1K8W 11.7 TRUB_ECOLI
22 PsiBlast_CBE 67.9934% -81 - C6 -1ZE1 - TRUB_THEMA -
21 PsiBlast_CBE 67.2534% -89 - C6 -1ZE1 - TRUB_THEMA -
27 PsiBlast_CBE 66.5632%-103 - C6 -3LWR 2.8 TRUB_PYRFU
19 PsiBlast_PDB 65.2032%-106 - C6 -3LWP 4.8 TRUB_PYRFU
18 PsiBlast_PDB 64.9332%-100 - C6 -3LWO 4.6 TRUB_PYRFU
26 PsiBlast_CBE 64.4232%-102 - C6 -3LWV 3.4 TRUB_PYRFU
16 PsiBlast_PDB 64.4032% -97 - C6 -3HAX 9.6 TRUB_PYRFU
11 PsiBlast_PDB 64.2632% -95 - C6 -3HJW 7.4 TRUB_PYRFU
12 PsiBlast_PDB 63.9532%-104 - C6 -3HJY 3.4 TRUB_PYRFU
20 PsiBlast_PDB 63.8332%-101 - C6 -3LWQ 5.2 TRUB_PYRFU
28 PsiBlast_CBE 61.0131% -90 - C6 -2RFK 3.3 TRUB_PYRFU
17 PsiBlast_PDB 60.8232% -93 - C6 -3HAY 8.7 TRUB_PYRFU
24 PsiBlast_CBE 55.6934% -83 - C6 -1ZE2 8.1 TRUB_THEMA