@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2845c: (2016-05-14 )
MITRMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPDTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLVAGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELLGMPWIVVVGRGWADGVVELRDRFSGQTRELVAGASLATDIAAAVTG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P5A_A_24(2J3L)
SYP_ENTFA
[Raw transfer]



ATP_A_3(2J3M)
SYP_ENTFA
[Raw transfer]



P5A_A_24(2J3L)
SYP_ENTFA
[Raw transfer]



ATP_B_7(2J3M)
SYP_ENTFA
[Raw transfer]



P5A_B_25(2J3L)
SYP_ENTFA
[Raw transfer]



P5A_A_24(2J3L)
SYP_ENTFA
[Raw transfer]
66 Fugue 94.1641% -85 - C1 -2J3L 9.2 SYP_ENTFA
1 PsiBlast_PDB 93.5441% -81 - C1 -2J3L 9.2 SYP_ENTFA
22 PsiBlast_CBE 93.1241% -82 - C1 -2J3L 9.1 SYP_ENTFA
21 PsiBlast_CBE 92.2641% -80 - C1 -2J3M 8.9 SYP_ENTFA
2 PsiBlast_PDB 91.4541% -80 - C1 -2J3M 8.1 SYP_ENTFA
44 HHSearch 90.8239% -80 * C1 *2J3L 7.5 SYP_ENTFA
48 HHSearch 66.3724% -87 - C1 -1NJ8 - SYP_METJA -
50 HHSearch 65.9922% -87 - C1 -1HC7 - SYP_THET8 -
68 Fugue 65.4023% -81 - C1 -1HC7 - SYP_THET8 -
57 HHSearch 64.6820% -92 - C1 -4HVC - SYEP_HUMAN -
60 HHSearch 64.4822% -86 - C1 -3IAL - ? -
45 HHSearch 64.4737% -13 - C1 -2I4L - SYP_RHOPA -
62 HHSearch 64.1818% -84 - C1 -1EVL - SYT_ECOLI -
47 HHSearch 63.9623% -84 - C1 -1NJ1 - SYP_METTH -
59 HHSearch 63.4621% -62 - C1 -1QF6 - SYT_ECOLI -
49 HHSearch 61.6919%-100 - C1 -4NCX - SYP_PLAF7 -
63 HHSearch 61.4321% -60 - C1 -1NYR - SYT_STAAW -
55 HHSearch 59.0420% -75 - C1 -1HTT - SYH_ECOLI -
46 HHSearch 57.2118% -77 - C1 -4X5O - SYHC_HUMAN -
23 PsiBlast_CBE 56.9943% -69 - C1 -2I4O - SYP_RHOPA -