@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2857c: (2016-05-14 )
MMDLSQRLAGRVAVITGGGSGIGLAAGRRMRAEGATIVVGDVDVEAGGAAADELSGLFVPTDVCDEDAVNGLFDGAAETYGRIDIAFNNAGISPPEDNLIENTELAAWQRVQDVNLKSVYLCCRAALRHMVLAGKGSIVNTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKNPERAARRMVHVPLGRFAEPDEIAAAVAFLASDDASFITASTFLVDGGISSAYVTPL

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_C_8(4NBU)
?
[Raw transfer]




NAD_D_18(4WEC)
?
[Raw transfer]




NAI_D_9(4NBU)
?
[Raw transfer]




NAD_C_15(4WEC)
?
[Raw transfer]




NAI_B_6(4NBU)
?
[Raw transfer]




NAI_A_5(4NBU)
?
[Raw transfer]




NAP_A_3(4RF2)
?
[Raw transfer]




NAD_B_10(4WEC)
?
[Raw transfer]




NAD_A_5(3WDS)
?
[Raw transfer]




NAD_A_4(1X1T)
?
[Raw transfer]




NAD_A_5(4WEC)
?
[Raw transfer]




NAD_A_5(4WEC)
?
[Raw transfer]




NAD_B_7(2CFC)
HCDR_XANP2
[Raw transfer]




NAD_C_9(2CFC)
HCDR_XANP2
[Raw transfer]




NAD_A_5(4FN4)
?
[Raw transfer]




NAD_D_10(2ZTV)
?
[Raw transfer]




NAD_B_7(2ZTV)
?
[Raw transfer]




NAD_C_9(2ZTV)
?
[Raw transfer]




1PS_B_6(4URE)
?
[Raw transfer]




3HL_A_6(2ZTL)
?
[Raw transfer]




3HL_C_12(2ZTL)
?
[Raw transfer]




EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]




1PS_A_5(4URF)
?
[Raw transfer]




THJ_A_4(3GED)
?
[Raw transfer]




21 PsiBlast_CBE 98.1185% -96 - C1 -4WEC 9.5 ?
22 PsiBlast_CBE 97.8885% -99 - C1 -4WEC 9.4 ?
1 PsiBlast_PDB 97.7485% -94 - C1 -4WEC 7.3 ?
23 PsiBlast_CBE 97.6685% -95 - C1 -4WEC 7.2 ?
111 HHSearch 96.8785% -95 - C1 -4WEC 7.3 ?
15 PsiBlast_PDB 79.2039%-104 - C1 -2ZTV - ? -
52 PsiBlast_CBE 78.6734% -90 - C1 -1RWB - DHG_BACME -
77 PsiBlast_CBE 78.6434% -90 - C1 -1GCO - DHG_BACME -
3 PsiBlast_PDB 78.6439%-101 - C1 -4NBU 11.4 ?
25 PsiBlast_CBE 78.5639%-101 - C1 -4NBU 11.8 ?
82 PsiBlast_CBE 78.4934% -90 - C1 -1GEE - DHG_BACME -
92 PsiBlast_CBE 78.3139%-101 - C1 -2ZTM - ? -
78 PsiBlast_CBE 78.2234% -90 - C1 -1GCO - DHG_BACME -
30 PsiBlast_CBE 78.2240% -93 - C1 -1IY8 - LVR_LEIAQ -
80 PsiBlast_CBE 78.2134% -89 - C1 -1GCO - DHG_BACME -
84 PsiBlast_CBE 78.1734% -89 - C1 -1GEE - DHG_BACME -
14 PsiBlast_PDB 78.1439%-102 - C1 -2ZTL 3.2 ?
57 PsiBlast_CBE 78.1339%-103 - C1 -2ZTL - ? -
4 PsiBlast_PDB 78.1040% -93 - C1 -1IY8 - LVR_LEIAQ -
81 PsiBlast_CBE 77.9934% -89 - C1 -1GEE - DHG_BACME -
58 PsiBlast_CBE 77.8939%-102 - C1 -2ZTL 3.9 ?
24 PsiBlast_CBE 77.8739% -99 - C1 -4NBU 11.7 ?
55 PsiBlast_CBE 77.5539% -99 - C1 -2ZTV 7.7 ?
116 HHSearch 77.4537% -88 - C1 -3WDS 11.1 ?
26 PsiBlast_CBE 76.8439% -99 - C1 -4NBU 11.6 ?
54 PsiBlast_CBE 76.5439%-101 - C1 -2ZTV 7.7 ?
19 PsiBlast_PDB 76.2134% -84 - C1 -4RF2 12.0 ?
63 PsiBlast_CBE 75.5135% -99 - C1 -2CFC 7.1 HCDR_XANP2
56 PsiBlast_CBE 74.2239%-104 - C1 -2ZTV 7.5 ?
62 PsiBlast_CBE 74.1535%-100 - C1 -2CFC 7.5 HCDR_XANP2
68 PsiBlast_CBE 73.7636% -91 - C1 -4URF 2.2 ?
72 PsiBlast_CBE 73.5834% -92 - C1 -4I08 3.1 FABG_VIBCH
13 PsiBlast_PDB 72.3039%-101 - C1 -1X1T 8.1 ?
69 PsiBlast_CBE 72.2936% -93 - C1 -4URE 3.6 ?
118 HHSearch 71.6733% -72 - C1 -4FN4 6.7 ?