@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2906c: (2016-05-14 )
MRIDIVTIFPACLDPLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(1P9P)
TRMD_ECOLI
[Raw transfer]




4GX_A_2(4YQI)
?
[Raw transfer]




SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]




SAH_A_2(4IG6)
TRMD_ANAPZ
[Raw transfer]




SAH_C_3(1UAL)
TRMD_HAEIN
[Raw transfer]




SAH_A_3(4H3Y)
TRMD_BURP8
[Raw transfer]




SFG_A_2(4YVH)
TRMD_HAEIN
[Raw transfer]




SAH_A_3(4H3Z)
TRMD_BURP8
[Raw transfer]




ADN_A_2(3AXZ)
TRMD_HAEIN
[Raw transfer]




4GT_A_2(4YQJ)
?
[Raw transfer]




SFG_B_5(4YVI)
TRMD_HAEIN
[Raw transfer]




21X_A_3(4MCC)
TRMD_HAEIN
[Raw transfer]




4G3_A_2(4YQ4)
?
[Raw transfer]




4G4_A_2(4YQ7)
?
[Raw transfer]




4GN_A_2(4YQA)
?
[Raw transfer]




4H4_A_2(4YQL)
?
[Raw transfer]




SAH_A_3(4H3Z)
TRMD_BURP8
[Raw transfer]




SAM_C_3(1UAK)
TRMD_HAEIN
[Raw transfer]




SAM_A_2(4YVG)
TRMD_HAEIN
[Raw transfer]




4GY_A_2(4YQG)
?
[Raw transfer]




SAH_E_5(1UAM)
TRMD_HAEIN
[Raw transfer]




EFW_A_2(4YQC)
?
[Raw transfer]




21W_B_8(4MCB)
TRMD_HAEIN
[Raw transfer]




4H1_A_2(4YQO)
?
[Raw transfer]




4GZ_A_2(4YQD)
TRMD_HAEIN
[Raw transfer]




SAH_B_6(4H3Z)
TRMD_BURP8
[Raw transfer]




4GZ_A_2(4YQD)
TRMD_HAEIN
[Raw transfer]




4GM_A_2(4YQB)
?
[Raw transfer]




SFG_A_4(4YVK)
TRMD_HAEIN
[Raw transfer]




SFG_A_4(4YVI)
TRMD_HAEIN
[Raw transfer]




SFG_A_4(4YVJ)
TRMD_HAEIN
[Raw transfer]




SFG_B_5(4YVJ)
TRMD_HAEIN
[Raw transfer]




4H6_A_2(4YQP)
?
[Raw transfer]




4H3_A_2(4YQN)
?
[Raw transfer]




4GO_A_2(4YQ9)
?
[Raw transfer]




4FD_A_2(4YPW)
?
[Raw transfer]




4H8_A_2(4YQT)
?
[Raw transfer]




4FM_A_2(4YQ0)
?
[Raw transfer]




22L_A_2(4MCD)
TRMD_HAEIN
[Raw transfer]




4H9_A_2(4YQS)
?
[Raw transfer]




21X_B_4(4MCC)
TRMD_HAEIN
[Raw transfer]




SFG_B_5(4YVK)
TRMD_HAEIN
[Raw transfer]




4GS_A_2(4YQK)
?
[Raw transfer]




21W_A_5(4MCB)
TRMD_HAEIN
[Raw transfer]




4FX_A_2(4YQ6)
?
[Raw transfer]




4FN_A_2(4YQ1)
?
[Raw transfer]




4G1_A_2(4YQ3)
?
[Raw transfer]




EFY_A_2(4YQ2)
?
[Raw transfer]




4FL_A_2(4YPZ)
?
[Raw transfer]




4FG_A_2(4YPX)
?
[Raw transfer]




4F9_A_2(4YPY)
?
[Raw transfer]




EDO_B_6(3QUV)
?
[Raw transfer]




EDO_A_4(3QUV)
?
[Raw transfer]




EDO_A_4(3QUV)
?
[Raw transfer]




68 HHSearch 97.7476%-145 - C9 -3QUV 2.4 ?
21 PsiBlast_CBE 97.6276%-142 - C9 -3QUV 2.2 ?
1 PsiBlast_PDB 97.4976%-146 - C9 -3QUV 2.4 ?
3 PsiBlast_PDB 88.5947%-128 - C9 -4IG6 7.2 TRMD_ANAPZ
57 Fugue 86.3341%-120 - C9 -1UAL 6.2 TRMD_HAEIN
9 PsiBlast_PDB 85.3040%-117 - C9 -1UAM 6.5 TRMD_HAEIN
69 HHSearch 85.1342%-124 - C9 -4YQD 7.6 TRMD_HAEIN
23 PsiBlast_CBE 84.7340%-116 - C9 -4MCB 6.8 TRMD_HAEIN
67 HHSearch 84.4544%-123 - C9 -3IEF - TRMD_BARHE -
19 PsiBlast_PDB 83.8640%-123 - C9 -4YQD 7.6 TRMD_HAEIN
46 PsiBlast_CBE 83.8240%-126 - C9 -4YQ3 8.1 ?
8 PsiBlast_PDB 83.6340%-121 - C9 -1UAL 6.2 TRMD_HAEIN
45 PsiBlast_CBE 83.5340%-119 - C9 -4YQ4 5.6 ?
26 PsiBlast_CBE 83.5140%-116 - C9 -4YVI 6.7 TRMD_HAEIN
24 PsiBlast_CBE 83.2640%-115 - C9 -4YVK 5.7 TRMD_HAEIN
6 PsiBlast_PDB 83.0940%-127 - C9 -1UAJ - TRMD_HAEIN -
34 PsiBlast_CBE 82.9340%-127 - C9 -4YQK 4.4 ?
2 PsiBlast_PDB 82.8947%-155 - C9 -3KNU - TRMD_ANAPZ -
12 PsiBlast_PDB 82.8840%-125 - C9 -4MCD 5.6 TRMD_HAEIN
25 PsiBlast_CBE 82.7640%-116 - C9 -4YVJ 5.4 TRMD_HAEIN
27 PsiBlast_CBE 82.6440%-128 - C9 -4YQT 5.6 ?
51 PsiBlast_CBE 82.6140%-122 - C9 -4YPY 4.6 ?
70 HHSearch 82.6041%-126 - C9 -4H3Z 7.0 TRMD_BURP8
35 PsiBlast_CBE 82.5540%-128 - C9 -4YQJ 5.3 ?
15 PsiBlast_PDB 82.4840%-120 - C9 -4YVH 6.7 TRMD_HAEIN
22 PsiBlast_CBE 82.2740%-129 - C9 -4MCC 6.3 TRMD_HAEIN
28 PsiBlast_CBE 82.2040%-124 - C9 -4YQS 5.7 ?
40 PsiBlast_CBE 82.1640%-125 - C9 -4YQA 5.5 ?
7 PsiBlast_PDB 82.0940%-122 - C9 -1UAK 7.2 TRMD_HAEIN
16 PsiBlast_PDB 81.9740%-119 - C9 -4YVI 6.8 TRMD_HAEIN
13 PsiBlast_PDB 81.9740%-128 - C9 -3AXZ 5.7 TRMD_HAEIN
48 PsiBlast_CBE 81.9440%-122 - C9 -4YQ1 9.1 ?
41 PsiBlast_CBE 81.8740%-122 - C9 -4YQ9 5.6 ?
14 PsiBlast_PDB 81.8740%-121 - C9 -4YVG 7.2 TRMD_HAEIN
36 PsiBlast_CBE 81.8640%-131 - C9 -4YQI 5.9 ?
49 PsiBlast_CBE 81.7840%-128 - C9 -4YQ0 5.6 ?
39 PsiBlast_CBE 81.7840%-124 - C9 -4YQB 5.8 ?
30 PsiBlast_CBE 81.7640%-129 - C9 -4YQP 5.1 ?
33 PsiBlast_CBE 81.6940%-126 - C9 -4YQL 4.6 ?
32 PsiBlast_CBE 81.5840%-129 - C9 -4YQN 4.7 ?
42 PsiBlast_CBE 81.5440%-125 - C9 -4YQ7 5.8 ?
38 PsiBlast_CBE 81.5440%-127 - C9 -4YQC 5.5 ?
37 PsiBlast_CBE 81.4440%-129 - C9 -4YQG 5.0 ?
20 PsiBlast_PDB 81.3440%-128 - C9 -4YPW 5.1 ?
18 PsiBlast_PDB 81.1940%-118 - C9 -4YVK 6.9 TRMD_HAEIN
50 PsiBlast_CBE 81.1440%-128 - C9 -4YPZ 4.3 ?
52 PsiBlast_CBE 81.0140%-126 - C9 -4YPX 4.2 ?
31 PsiBlast_CBE 80.6640%-127 - C9 -4YQO 5.8 ?
17 PsiBlast_PDB 80.5840%-116 - C9 -4YVJ 6.8 TRMD_HAEIN
43 PsiBlast_CBE 80.5140%-128 - C9 -4YQ6 6.2 ?
56 PsiBlast_CBE 80.1639%-119 - C9 -4H3Y 6.7 TRMD_BURP8
47 PsiBlast_CBE 79.4140%-124 - C9 -4YQ2 8.4 ?
5 PsiBlast_PDB 79.1242%-125 - C9 -1P9P 6.3 TRMD_ECOLI
54 PsiBlast_CBE 78.6239%-123 - C9 -4H3Z 7.0 TRMD_BURP8
11 PsiBlast_PDB 78.4240%-124 - C9 -4MCC 6.4 TRMD_HAEIN
53 PsiBlast_CBE 77.5739%-121 - C9 -4H3Z 6.3 TRMD_BURP8
10 PsiBlast_PDB 76.5340%-125 - C9 -4MCB 6.6 TRMD_HAEIN