@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2967c: (2016-05-15 )
MFSKVLVANRGEIAIRAFRAAYELGVGTVAVYPYEDRNSQHRLKADESYQIGDIGHPVHAYLSVDEIVATARRAGADAIYPGYGFLSENPDLAAACAAAGISFVGPSAEVLELAGNKSRAIAAAREAGLPVLMSSAPSASVDELLSVAAGMPFPLFVKAVAGGGGRGMRRVGDIAALPEAIEAASREAESAFGDPTVYLEQAVINPRHIEVQILADNLGDVIHLYERDCSVQRRHQKVIELAPAPHLDAELRYKMCVDAVAFARHIGYSCAGTVEFLLDERGEYVFIEMNPRVQVEHTVTEEITDVDLVASQLRIAAGETLEQLGLRQEDIAPHGAALQCRITTEDPANGFRPDTGRISALRTAGGAGVRLDGSTNLGAEISPYFDSMLVKLTCRGRDLPTAVSRARRAIAEFRIRGVSTNIPFLQAVLDDPDFRAGRVTTSFIDERPQLLTARASADRGTKILNFLADVTVNNPYGSRPSTIYPDDKLPDLDLRAAPPAGSKQRLVKLGPEGFARWLRESAAVGVTDTTFRDAHQSLLATRVRTSGLSRVAPYLARTMPQLLSVECWGGATYDVALRFLKEDPWERLATLRAAMPNICLQMLLRGRNTVGYTPYPEIVTSAFVQEATATGIDIFRIFDALNNIESMRPAIDAVRETGSAIAEVAMCYTGDLTDPGEQLYTLDYYLKLAEQIVDAGAHVLAIKDMAGLLRPPAAQRLVSALRSRFDLPVHLHTHDTPGGQLASYVAAWHAGADAVDGAAAPLAGTTSQPALSSIVAAAAHTEYDTGLSLSAVCALEPYWEALRKVYAPFESGLPGPTGRVYHHEIPGGQLSNLRQQAIALGLGDRFEEIEEAYAGADRVLGRLVKVTPTSKVVGDLALALVGAGVSADEFASDPARFGIPESVLGFLRGELGDPPGGWPEPLRTAALAGRGAARPTAQLAADDEIALSSVGAKRQATLNRLLFPSPTKEFNEHREAYGDTSQLSANQFFYGLRQGEEHRVKLERGVELLIGLEAISEPDERGMRTVMCILNGQLRPVLVRDRSIASAVPAAEKADRGNPGHIAAPFAGVVTVGVCVGERVGAGQTIATIEAMKMEAPITAPVAGTVERVAVSDTAQVEGGDLLVVVS

Atome Classification :

(67 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




30 PsiBlast_CBE 82.9246% -91 - C1 -3HB9 - ? -
25 PsiBlast_CBE 82.7246% -90 - C1 -3HO8 - ? -
26 PsiBlast_CBE 82.3046% -90 - C1 -3HO8 - ? -
21 PsiBlast_CBE 81.2146% -90 - C1 -4HNT - ? -
23 PsiBlast_CBE 81.0146% -90 - C1 -4HNT - ? -
33 PsiBlast_CBE 80.7446% -89 - C1 -4HNU - ? -
2 PsiBlast_PDB 80.3446% -88 - C1 -3HO8 - ? -
35 PsiBlast_CBE 80.2246% -90 - C1 -4HNU - ? -
3 PsiBlast_PDB 77.8846% -91 - C1 -3BG5 - ? -
7 PsiBlast_PDB 77.1746% -91 - C1 -4HNV - ? -
6 PsiBlast_PDB 77.0546% -90 - C1 -3HBL - ? -
27 PsiBlast_CBE 76.8546% -94 - C1 -3BG5 - ? -
36 PsiBlast_CBE 76.7346% -93 - C1 -3HBL - ? -
29 PsiBlast_CBE 76.7146% -93 - C1 -3BG5 - ? -
4 PsiBlast_PDB 76.6846% -89 - C1 -3HB9 - ? -
39 PsiBlast_CBE 76.4046% -93 - C1 -4HNV - ? -
44 PsiBlast_CBE 76.3246% -90 - C1 -4QSH - ? -
119 HHSearch 76.3146% -90 - C1 -4QSH - ? -
118 HHSearch 76.3146% -89 - C1 -3HBL - ? -
8 PsiBlast_PDB 76.2846% -89 - C1 -4QSK - ? -
15 PsiBlast_PDB 54.1345% -89 - C1 -4MV3 3.5 ACCC_HAEIN
55 PsiBlast_CBE 53.7444% -85 - C1 -2W71 6.4 ACCC_ECOLI
57 PsiBlast_CBE 53.7144% -83 - C1 -2W70 3.5 ACCC_ECOLI
91 PsiBlast_CBE 53.6744% -83 - C1 -3G8D 5.1 ACCC_ECOLI
50 PsiBlast_CBE 53.6344% -82 - C1 -3JZF 9.4 ACCC_ECOLI
60 PsiBlast_CBE 53.5944% -83 - C1 -2W6Z 4.5 ACCC_ECOLI
68 PsiBlast_CBE 53.5844% -85 - C1 -2W6M 3.5 ACCC_ECOLI
19 PsiBlast_PDB 53.5245% -89 - C1 -4RZQ 3.3 ACCC_HAEIN
63 PsiBlast_CBE 53.4044% -82 - C1 -2W6P 5.4 ACCC_ECOLI
48 PsiBlast_CBE 53.3544% -82 - C1 -3JZI 9.1 ACCC_ECOLI
90 PsiBlast_CBE 53.2344% -83 - C1 -3RV4 8.1 ACCC_ECOLI
56 PsiBlast_CBE 53.1844% -83 - C1 -2W71 6.3 ACCC_ECOLI
71 PsiBlast_CBE 53.1644% -85 - C1 -2VR1 4.3 ACCC_ECOLI
86 PsiBlast_CBE 53.1544% -83 - C1 -3G8C 5.8 ACCC_ECOLI
135 HHSearch 52.9340% -80 - C1 -3OUZ 7.3 ?
61 PsiBlast_CBE 52.9144% -85 - C1 -2W6Q 4.6 ACCC_ECOLI
66 PsiBlast_CBE 52.8644% -83 - C1 -2W6N 5.0 ACCC_ECOLI
58 PsiBlast_CBE 52.8444% -82 - C1 -2W70 3.7 ACCC_ECOLI
73 PsiBlast_CBE 52.8244% -82 - C1 -2V5A 5.8 ACCC_ECOLI
74 PsiBlast_CBE 52.8044% -84 - C1 -2V59 4.9 ACCC_ECOLI
62 PsiBlast_CBE 52.7244% -82 - C1 -2W6Q 4.2 ACCC_ECOLI
79 PsiBlast_CBE 52.7144% -83 - C1 -2J9G 5.7 ACCC_ECOLI
16 PsiBlast_PDB 52.7145% -85 - C1 -4MV4 4.3 ACCC_HAEIN
104 PsiBlast_CBE 52.5940% -83 - C1 -2VPQ 6.2 ?
64 PsiBlast_CBE 52.5744% -85 - C1 -2W6O 3.5 ACCC_ECOLI
87 PsiBlast_CBE 52.5444% -84 - C1 -3G8C 6.0 ACCC_ECOLI
75 PsiBlast_CBE 52.4044% -83 - C1 -2V59 4.9 ACCC_ECOLI
76 PsiBlast_CBE 52.3444% -82 - C1 -2V58 6.0 ACCC_ECOLI
65 PsiBlast_CBE 52.3144% -85 - C1 -2W6O 3.7 ACCC_ECOLI
17 PsiBlast_PDB 52.2645% -88 - C1 -4MV8 4.4 ACCC_HAEIN
67 PsiBlast_CBE 52.2444% -82 - C1 -2W6N 5.4 ACCC_ECOLI
69 PsiBlast_CBE 52.1844% -81 - C1 -2W6M 3.5 ACCC_ECOLI
93 PsiBlast_CBE 51.9245% -81 - C1 -2VQD 6.8 ACCC_PSEAE
83 PsiBlast_CBE 51.8444% -83 - C1 -3RV3 7.8 ACCC_ECOLI
77 PsiBlast_CBE 51.7144% -81 - C1 -2V58 5.9 ACCC_ECOLI
89 PsiBlast_CBE 51.7044% -82 - C1 -1DV2 5.6 ACCC_ECOLI
49 PsiBlast_CBE 51.6144% -81 - C1 -3JZI 8.2 ACCC_ECOLI
137 HHSearch 51.5945% -83 - C1 -4MV4 4.3 ACCC_HAEIN
88 PsiBlast_CBE 51.3644% -83 - C1 -1DV2 3.9 ACCC_ECOLI
84 PsiBlast_CBE 51.2344% -81 - C1 -3RUP 6.8 ACCC_ECOLI
82 PsiBlast_CBE 51.2044% -83 - C1 -3RV3 6.3 ACCC_ECOLI
105 PsiBlast_CBE 50.8740% -80 - C1 -2VPQ 6.9 ?
85 PsiBlast_CBE 50.8344% -80 - C1 -3RUP 7.9 ACCC_ECOLI
78 PsiBlast_CBE 49.7144% -85 - C1 -2J9G 7.0 ACCC_ECOLI
134 HHSearch 48.7441% -76 - C1 -2VPQ 6.8 ?
106 PsiBlast_CBE 45.1637% -83 - C1 -3VA7 2.1 ?
129 HHSearch 44.5238% -80 * C1 *3VA7 2.1 ?