@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2976c: (2016-05-15 )
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_A_2(4WRU)
UNG_MYCTU
[Raw transfer]




5NU_A_2(4WS5)
UNG_MYCTU
[Raw transfer]




URA_A_2(4WPL)
UNG_MYCTU
[Raw transfer]




URF_A_2(4WS0)
UNG_MYCTU
[Raw transfer]




FCF_A_2(3FCF)
UNG_HUMAN
[Raw transfer]




URF_A_2(4WS1)
UNG_MYCTU
[Raw transfer]




URA_A_2(4WRV)
UNG_MYCTU
[Raw transfer]




3FL_B_8(3FCL)
UNG_HUMAN
[Raw transfer]




GOL_A_8(4WRW)
UNG_MYCTU
[Raw transfer]




6UA_A_2(4WS3)
UNG_MYCTU
[Raw transfer]




URA_B_2(5EUG)
UNG_ECOLI
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




5UC_A_2(4WS7)
UNG_MYCTU
[Raw transfer]




URA_B_2(2EUG)
UNG_ECOLI
[Raw transfer]




302_B_2(2HXM)
UNG_HUMAN
[Raw transfer]




3FL_A_3(3FCL)
UNG_HUMAN
[Raw transfer]




GOL_B_5(1OKB)
?
[Raw transfer]




URA_D_4(1UDH)
UNG_HHV11
[Raw transfer]




GOL_B_2(3EUG)
UNG_ECOLI
[Raw transfer]




GOL_A_3(1OKB)
?
[Raw transfer]




GOL_A_4(3ZOQ)
UNG_BACSU
[Raw transfer]




GOL_A_4(3ZOQ)
UNG_BACSU
[Raw transfer]




TUL_A_2(4WS8)
UNG_MYCTU
[Raw transfer]




FCK_B_2(3FCK)
UNG_HUMAN
[Raw transfer]




DUR_A_2(2C53)
UNG_HHV11
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




URA_B_2(1FLZ)
UNG_ECOLI
[Raw transfer]




NACID_B_2(4UQM)
UNG_DEIRA
[Raw transfer]

-

NACID_B_2(4UQM)
UNG_DEIRA
[Raw transfer]

-

CIT_A_2(4WRY)
UNG_MYCTU
[Raw transfer]




CIT_A_3(4WS4)
UNG_MYCTU
[Raw transfer]




CIT_A_2(4WPK)
UNG_MYCTU
[Raw transfer]




CIT_A_2(4WPK)
UNG_MYCTU
[Raw transfer]




FLC_A_2(3A7N)
UNG_MYCTU
[Raw transfer]




CIT_A_4(4WS6)
UNG_MYCTU
[Raw transfer]




CIT_A_3(4WS2)
UNG_MYCTU
[Raw transfer]




CHAIN_B_1(2OYT)
UNG_HUMAN
[Raw transfer]

-

CIT_A_2(4WRZ)
UNG_MYCTU
[Raw transfer]




NACID_D_1(1LAU)
UNG_HHV11
[Raw transfer]

-

NACID_A_1(2SSP)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(1EMJ)
UNG_HUMAN
[Raw transfer]

-

NACID_A_1(1SSP)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(1EMH)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(1Q3F)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

NACID_B_1(2OXM)
UNG_HUMAN
[Raw transfer]

-

NACID_A_1(4SKN)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

19 PsiBlast_PDB 98.90100%-127 - C9 -4WS8 3.1 UNG_MYCTU
11 PsiBlast_PDB 98.87100%-123 - C9 -4WS0 2.6 UNG_MYCTU
9 PsiBlast_PDB 98.81100%-121 - C9 -4WRY 3.2 UNG_MYCTU
8 PsiBlast_PDB 98.70100%-126 - C9 -4WRX - UNG_MYCTU -
10 PsiBlast_PDB 98.68100%-128 - C9 -4WRZ 1.8 UNG_MYCTU
5 PsiBlast_PDB 98.63100%-125 - C9 -4WRU 3.5 UNG_MYCTU
12 PsiBlast_PDB 98.62100%-123 - C9 -4WS1 3.2 UNG_MYCTU
1 PsiBlast_PDB 98.58100%-127 - C9 -2ZHX - UNG_MYCTU -
16 PsiBlast_PDB 98.49100%-129 - C9 -4WS5 3.9 UNG_MYCTU
3 PsiBlast_PDB 98.46100%-126 - C9 -4WPK 1.9 UNG_MYCTU
2 PsiBlast_PDB 98.36100%-131 - C9 -3A7N 2.4 UNG_MYCTU
17 PsiBlast_PDB 98.30100%-128 - C9 -4WS6 3.1 UNG_MYCTU
13 PsiBlast_PDB 98.24100%-129 - C9 -4WS2 3.1 UNG_MYCTU
15 PsiBlast_PDB 98.21100%-127 - C9 -4WS4 2.5 UNG_MYCTU
6 PsiBlast_PDB 98.16100%-124 - C9 -4WRV 3.4 UNG_MYCTU
14 PsiBlast_PDB 98.10100%-128 - C9 -4WS3 3.6 UNG_MYCTU
4 PsiBlast_PDB 98.10100%-130 - C9 -4WPL 3.3 UNG_MYCTU
18 PsiBlast_PDB 98.07100%-124 - C9 -4WS7 3.3 UNG_MYCTU
69 HHSearch 97.6899%-126 - C9 -4WPK 1.9 UNG_MYCTU
7 PsiBlast_PDB 97.40100%-123 - C9 -4WRW 2.4 UNG_MYCTU
20 PsiBlast_PDB 80.3545%-108 - C9 -3ZOQ 2.1 UNG_BACSU
70 HHSearch 79.1145%-111 - C9 -3ZOQ 2.1 UNG_BACSU
72 HHSearch 78.5539%-107 - C9 -3CXM 3.3 ?
21 PsiBlast_CBE 78.5047% -97 - C9 -4UQM 9.1 UNG_DEIRA
74 HHSearch 78.2645% -97 - C9 -4UQM 9.1 UNG_DEIRA
26 PsiBlast_CBE 76.8842%-106 - C9 -3CXM 3.3 ?
73 HHSearch 75.1538%-103 * C9 *3FCI 5.9 UNG_HUMAN
68 HHSearch 74.7138%-101 - C9 -3UF7 4.6 UNG_ECOLI
47 PsiBlast_CBE 73.6840% -94 - C9 -5EUG 3.3 UNG_ECOLI
46 PsiBlast_CBE 73.2841%-103 - C9 -3UF7 4.6 UNG_ECOLI
44 PsiBlast_CBE 73.0841% -99 - C9 -3EUG 2.6 UNG_ECOLI
45 PsiBlast_CBE 73.0441% -98 - C9 -2EUG 3.3 UNG_ECOLI
43 PsiBlast_CBE 70.8641% -98 - C9 -1FLZ 3.6 UNG_ECOLI
37 PsiBlast_CBE 70.0645% -93 - C9 -1SSP 8.2 UNG_HUMAN
41 PsiBlast_CBE 69.9645% -91 - C9 -2SSP 7.0 UNG_HUMAN
31 PsiBlast_CBE 69.4745%-100 - C9 -3FCK 6.2 UNG_HUMAN
32 PsiBlast_CBE 68.9145% -98 - C9 -3FCI 5.9 UNG_HUMAN
33 PsiBlast_CBE 68.8445%-100 - C9 -3FCF 6.8 UNG_HUMAN
38 PsiBlast_CBE 68.6445% -94 - C9 -1Q3F 1.9 UNG_HUMAN
35 PsiBlast_CBE 68.5645% -97 - C9 -2OXM 8.5 UNG_HUMAN
34 PsiBlast_CBE 68.0245% -94 - C9 -2OYT 9.5 UNG_HUMAN
36 PsiBlast_CBE 67.8545% -95 - C9 -2HXM 7.2 UNG_HUMAN
27 PsiBlast_CBE 67.7446% -92 - C9 -1OKB 3.1 ?
28 PsiBlast_CBE 67.5946% -92 - C9 -1OKB 3.2 ?
40 PsiBlast_CBE 67.5045% -96 - C9 -1EMH 3.2 UNG_HUMAN
30 PsiBlast_CBE 67.3945% -93 - C9 -3FCL 5.7 UNG_HUMAN
42 PsiBlast_CBE 67.1844% -95 - C9 -4SKN 10.3 UNG_HUMAN
29 PsiBlast_CBE 67.1645% -91 - C9 -3FCL 6.0 UNG_HUMAN
39 PsiBlast_CBE 66.8945% -94 - C9 -1EMJ 8.3 UNG_HUMAN
52 PsiBlast_CBE 64.7442% -94 - C9 -1UDH 3.5 UNG_HHV11
54 PsiBlast_CBE 64.0442% -99 - C9 -1LAU 4.8 UNG_HHV11
56 PsiBlast_CBE 63.6841% -95 - C9 -2C53 4.0 UNG_HHV11