@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2995c: (2016-05-15 )
MKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATRGSERLATSDVGERIAAAL

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_18(4WUO)
LEU3_THET8
[Raw transfer]




NAD_A_4(4WUO)
LEU3_THET8
[Raw transfer]




NAD_X_2(3FMX)
TTUC_PSEPU
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]




NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




GGG_B_7(3TY3)
LYS12_SCHPO
[Raw transfer]




GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]




CIT_E_5(2D1C)
IDH_THET8
[Raw transfer]




CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]




CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]




GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_B_4(4XXV)
LEU3_BURTA
[Raw transfer]




GOL_A_5(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_A_3(2Y41)
LEU3_THET8
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_B_5(2Y41)
LEU3_THET8
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_B_6(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_A_2(3WZY)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VKZ)
LEU3_SHEON
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_A_2(3VL6)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL2)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZW)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VMJ)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL7)
LEU3_SHEON
[Raw transfer]




IPM_B_9(4Y1P)
?
[Raw transfer]




IPM_A_2(3WZX)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL4)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL3)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZV)
?
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_B_6(3VMK)
?
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




IPM_A_2(3VML)
LEU3_SHEON
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




NAD_A_2(1HEX)
LEU3_THET8
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




DEI_A_3(2ZTW)
LEU3_THET8
[Raw transfer]




NAD_A_2(2ZTW)
LEU3_THET8
[Raw transfer]




2PE_A_4(2Y3Z)
LEU3_THET8
[Raw transfer]




EOH_B_19(4WUO)
LEU3_THET8
[Raw transfer]




22 PsiBlast_CBE 99.67100%-113 - C5 -2G4O - LEU3_MYCTU -
2 PsiBlast_PDB 98.54100%-109 - C5 -2G4O - LEU3_MYCTU -
21 PsiBlast_CBE 98.01100%-109 - C5 -2G4O - LEU3_MYCTU -
104 HHSearch 97.98100%-108 - C5 -1W0D - LEU3_MYCTU -
25 PsiBlast_CBE 97.85100%-107 - C5 -1W0D - LEU3_MYCTU -
1 PsiBlast_PDB 97.83100%-109 - C5 -1W0D - LEU3_MYCTU -
24 PsiBlast_CBE 97.44100%-106 - C5 -1W0D - LEU3_MYCTU -
23 PsiBlast_CBE 96.82100%-109 - C5 -2G4O - LEU3_MYCTU -
37 PsiBlast_CBE 81.9640%-107 - C5 -3VMK 3.3 ?
38 PsiBlast_CBE 78.9538%-102 - C5 -1CNZ - LEU3_SALTY -
36 PsiBlast_CBE 78.6440%-107 - C5 -3VMK 3.0 ?
108 HHSearch 77.5240%-100 - C5 -1CNZ - LEU3_SALTY -
39 PsiBlast_CBE 77.5238%-100 - C5 -1CNZ - LEU3_SALTY -
76 PsiBlast_CBE 77.0039%-108 - C5 -1A05 3.7 LEU3_ACIFR
118 HHSearch 76.9742%-103 - C5 -3VMK 3.3 ?
41 PsiBlast_CBE 76.9138%-106 - C5 -4XXV 7.7 LEU3_BURTA
75 PsiBlast_CBE 76.8939%-106 - C5 -1A05 3.8 LEU3_ACIFR
40 PsiBlast_CBE 76.8741%-110 - C5 -3VML 3.3 LEU3_SHEON
62 PsiBlast_CBE 76.5937%-102 - C5 -1VLC - LEU3_THEMA -
44 PsiBlast_CBE 76.4638%-101 - C5 -4IWH - LEU3_BURTA -
55 PsiBlast_CBE 76.4540%-106 - C5 -3VKZ 3.3 LEU3_SHEON
54 PsiBlast_CBE 76.2140%-105 - C5 -3VL2 3.3 LEU3_SHEON
53 PsiBlast_CBE 76.1040%-103 - C5 -3VL3 3.2 LEU3_SHEON
46 PsiBlast_CBE 76.0440%-105 - C5 -3WZX 3.9 LEU3_SHEON
48 PsiBlast_CBE 76.0340%-105 - C5 -3WZV 4.2 ?
50 PsiBlast_CBE 75.9440%-104 - C5 -3VL7 3.0 LEU3_SHEON
49 PsiBlast_CBE 75.9140%-104 - C5 -3VMJ 3.2 LEU3_SHEON
52 PsiBlast_CBE 75.6640%-102 - C5 -3VL4 3.4 LEU3_SHEON
45 PsiBlast_CBE 75.2040%-103 - C5 -3WZY 3.2 LEU3_SHEON
47 PsiBlast_CBE 74.9040%-102 - C5 -3WZW 3.2 LEU3_SHEON
51 PsiBlast_CBE 74.6940%-102 - C5 -3VL6 3.2 LEU3_SHEON
112 HHSearch 73.9941%-102 - C5 -1A05 3.7 LEU3_ACIFR
34 PsiBlast_CBE 73.1342%-110 - C5 -4WUO 8.1 LEU3_THET8
9 PsiBlast_PDB 72.5442%-108 - C5 -2Y41 3.9 LEU3_THET8
35 PsiBlast_CBE 72.3842%-108 - C5 -4WUO 8.1 LEU3_THET8
117 HHSearch 72.0244%-101 - C5 -2Y3Z 3.1 LEU3_THET8
16 PsiBlast_PDB 71.8242%-109 - C5 -1HEX 5.2 LEU3_THET8
19 PsiBlast_PDB 71.6142%-104 - C5 -2ZTW 4.4 LEU3_THET8
32 PsiBlast_CBE 71.4242%-108 - C5 -2Y41 4.2 LEU3_THET8
7 PsiBlast_PDB 70.3142%-107 - C5 -2Y3Z 3.3 LEU3_THET8
128 Fugue 70.1434% -93 - C5 -2D1C 6.6 IDH_THET8
3 PsiBlast_PDB 69.6741% -97 - C5 -3FMX 6.4 TTUC_PSEPU
83 PsiBlast_CBE 68.2835% -96 - C5 -2D1C 6.8 IDH_THET8
110 HHSearch 67.4834% -96 - C5 -3TY4 2.9 LYS12_SCHPO
94 PsiBlast_CBE 66.7233% -96 - C5 -3TY4 2.9 LYS12_SCHPO
106 HHSearch 66.5634% -90 - C5 -2D1C 6.5 IDH_THET8
84 PsiBlast_CBE 66.3735% -95 - C5 -2D1C 6.6 IDH_THET8
96 PsiBlast_CBE 66.2633% -95 - C5 -3TY3 2.5 LYS12_SCHPO
125 HHSearch 66.0234% -92 - C5 -1HQS 2.8 IDH_BACSU
93 PsiBlast_CBE 65.5733% -99 - C5 -3TY4 3.4 LYS12_SCHPO
95 PsiBlast_CBE 65.5133% -96 - C5 -3TY3 3.5 LYS12_SCHPO
92 PsiBlast_CBE 64.1533%-104 - C5 -4Y1P 4.1 ?