@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3014c: (2016-05-16 )
MSSPDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNASEIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGDADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERDLLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSLDAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTLAGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVPILDEDGFRRLLADGPASRT

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]



AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]



3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]



3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]



AMP_A_2(3SGI)
DNLJ_MYCTU
[Raw transfer]



AMP_A_2(3SGI)
DNLJ_MYCTU
[Raw transfer]



9MJ_A_3(4UCS)
DNLJ_HAEIN
[Raw transfer]



IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]



IA7_A_2(4UFZ)
DNLJ_HAEIN
[Raw transfer]



3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]



D41_A_2(4UCO)
DNLJ_HAEIN
[Raw transfer]



0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]



0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]



0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]



3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]



3B9_A_5(3BAC)
DNLJ_HAEIN
[Raw transfer]



0XT_A_4(4GLW)
DNLJ_STRZP
[Raw transfer]



5U1_A_3(4UCT)
DNLJ_HAEIN
[Raw transfer]



AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]



AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]



0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]



AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]



1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]



AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]



AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]



AMP_B_6(1V9P)
DNLJ_THEFI
[Raw transfer]



JCF_A_3(4UCR)
DNLJ_HAEIN
[Raw transfer]



L5Y_A_3(4CC6)
DNLJ_STAAU
[Raw transfer]



AMP_A_5(1V9P)
DNLJ_THEFI
[Raw transfer]



1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]



AMP_B_6(1DGS)
DNLJ_THEFI
[Raw transfer]



1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]



GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]



L5V_A_3(4CC5)
DNLJ_STAAU
[Raw transfer]



I6G_A_3(4UCV)
DNLJ_HAEIN
[Raw transfer]



8HC_A_2(4UCU)
DNLJ_HAEIN
[Raw transfer]



NACID_D_3(4GLX)
DNLJ_ECOLI
[Raw transfer]
-
NACID_D_3(4GLX)
DNLJ_ECOLI
[Raw transfer]
-
NACID_D_3(2OWO)
DNLJ_ECOLI
[Raw transfer]
-
NACID_D_3(2OWO)
DNLJ_ECOLI
[Raw transfer]
-
4 PsiBlast_PDB 83.7743% -79 - C4 -1DGS 4.2 DNLJ_THEFI
43 HHSearch 83.6944% -83 - C4 -2OWO 6.3 DNLJ_ECOLI
6 PsiBlast_PDB 83.5644% -82 - C4 -1V9P 3.5 DNLJ_THEFI
62 Fugue 83.4543% -79 - C4 -1DGS 4.2 DNLJ_THEFI
21 PsiBlast_CBE 83.3643% -77 - C4 -1DGS 4.8 DNLJ_THEFI
22 PsiBlast_CBE 83.3344% -79 - C4 -1V9P 4.2 DNLJ_THEFI
45 HHSearch 83.0243% -85 - C4 -4GLX 6.7 DNLJ_ECOLI
3 PsiBlast_PDB 82.8143% -84 - C4 -2OWO 6.4 DNLJ_ECOLI
42 HHSearch 82.7443% -80 - C4 -1DGS 4.2 DNLJ_THEFI
5 PsiBlast_PDB 81.7642% -85 - C4 -4GLX 6.7 DNLJ_ECOLI
44 HHSearch 79.4199% -66 - C4 -3SGI 5.0 DNLJ_MYCTU
1 PsiBlast_PDB 79.4199% -66 - C4 -3SGI 5.0 DNLJ_MYCTU
46 HHSearch 72.98100% -83 - C4 -1ZAU 4.7 DNLJ_MYCTU
2 PsiBlast_PDB 72.98100% -83 - C4 -1ZAU 4.7 DNLJ_MYCTU
47 HHSearch 67.0743% -66 - C4 -3UQ8 5.1 DNLJ_HAEIN
30 PsiBlast_CBE 66.8241% -72 - C4 -4EFE 6.0 DNLJ_ENTFA
48 HHSearch 66.7542% -73 - C4 -4LH6 4.1 DNLJ_ENTFA
20 PsiBlast_PDB 66.5941% -72 - C4 -3BAA 6.9 DNLJ_ENTFA
27 PsiBlast_CBE 66.4541% -70 - C4 -1TA8 2.0 DNLJ_ENTFA
50 HHSearch 66.2240% -71 - C4 -3JSL - DNLJ_STAAU -
28 PsiBlast_CBE 66.2241% -72 - C4 -4LH7 4.4 DNLJ_ENTFA
23 PsiBlast_CBE 66.1141% -73 - C4 -3BAB 7.0 DNLJ_ENTFA
31 PsiBlast_CBE 65.9941% -70 - C4 -4EFB 5.9 DNLJ_ENTFA
19 PsiBlast_PDB 65.9341% -72 - C4 -3BA9 6.5 DNLJ_ENTFA
18 PsiBlast_PDB 65.9041% -71 - C4 -3BA8 5.3 DNLJ_ENTFA
32 PsiBlast_CBE 65.8041% -69 - C4 -4EEQ 4.6 DNLJ_ENTFA
29 PsiBlast_CBE 65.5641% -73 - C4 -4LH6 4.1 DNLJ_ENTFA
14 PsiBlast_PDB 65.1043% -61 - C4 -3UQ8 5.1 DNLJ_HAEIN
36 PsiBlast_CBE 64.5240% -71 - C4 -4CC5 3.3 DNLJ_STAAU
13 PsiBlast_PDB 63.2143% -68 - C4 -4UFZ 5.5 DNLJ_HAEIN
16 PsiBlast_PDB 63.1243% -65 - C4 -3PN1 5.9 DNLJ_HAEIN
8 PsiBlast_PDB 62.6743% -65 - C4 -4UCR 5.1 DNLJ_HAEIN
9 PsiBlast_PDB 62.5643% -64 - C4 -4UCS 4.6 DNLJ_HAEIN
35 PsiBlast_CBE 62.4940% -70 - C4 -4CC6 5.3 DNLJ_STAAU
11 PsiBlast_PDB 62.4043% -65 - C4 -4UCU 3.3 DNLJ_HAEIN
10 PsiBlast_PDB 62.0343% -64 - C4 -4UCT 4.3 DNLJ_HAEIN
7 PsiBlast_PDB 61.3843% -68 - C4 -4UCO 5.1 DNLJ_HAEIN
12 PsiBlast_PDB 61.3443% -65 - C4 -4UCV 3.6 DNLJ_HAEIN
51 HHSearch 58.4838% -57 * C4 *4GLW 4.0 DNLJ_STRZP
39 PsiBlast_CBE 57.0744% -61 - C4 -3BAC 6.9 DNLJ_HAEIN