@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3052c: (2016-05-16 )
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_C_7(3N39)
NRDI_ECOLI
[Raw transfer]




FMN_D_10(3N39)
NRDI_ECOLI
[Raw transfer]




FMN_D_12(3N3B)
NRDI_ECOLI
[Raw transfer]




FMN_C_8(3N3B)
NRDI_ECOLI
[Raw transfer]




FMN_C_7(3N3A)
NRDI_ECOLI
[Raw transfer]




FMN_C_7(3N3A)
NRDI_ECOLI
[Raw transfer]




FMN_D_10(3N3A)
NRDI_ECOLI
[Raw transfer]




24 HHSearch 97.3165%-154 - C4 -3N3A 10.5 NRDI_ECOLI
2 PsiBlast_PDB 97.0862%-158 - C4 -3N3A 10.5 NRDI_ECOLI
1 PsiBlast_PDB 96.6262%-164 - C4 -3N39 10.4 NRDI_ECOLI
21 PsiBlast_CBE 96.4762%-164 - C4 -3N3B 9.9 NRDI_ECOLI
22 PsiBlast_CBE 96.1862%-164 - C4 -3N3A 10.4 NRDI_ECOLI
3 PsiBlast_PDB 96.1062%-158 - C4 -3N3B 10.1 NRDI_ECOLI
23 PsiBlast_CBE 96.0062%-162 - C4 -3N39 9.9 NRDI_ECOLI
11 PsiBlast_PDB 82.4328%-141 - C4 -4N82 - ? -
8 PsiBlast_PDB 79.7236%-150 - C4 -2XOD - ? -
9 PsiBlast_PDB 79.0636%-141 - C4 -2XOE - ? -
5 PsiBlast_PDB 78.1236%-147 - C4 -2X2P - ? -
26 HHSearch 77.6633%-132 - C4 -1RLJ - NRDI_BACSU -
4 PsiBlast_PDB 77.6636%-150 - C4 -2X2O - ? -
45 Fugue 77.4725%-117 - C4 -4N82 - ? -
25 HHSearch 77.3337%-150 - C4 -2XOD - ? -
44 Fugue 77.2431%-121 - C4 -1RLJ - NRDI_BACSU -
6 PsiBlast_PDB 76.8236%-143 - C4 -4BMO - ? -
7 PsiBlast_PDB 76.0736%-139 - C4 -4BMP - ? -
27 HHSearch 71.1322%-100 - C4 -4N82 - ? -
10 PsiBlast_PDB 70.5734%-136 - C4 -1RLJ - NRDI_BACSU -