@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3056: (2016-05-16 )
MPTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTEVSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTKIRKLQAPSTDPDVITAAARHVLDLFELDRPVRLLGVRLELA

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DTP_A_17(1S0M)
DPO4_SULSO
[Raw transfer]




DTP_A_4(2BQR)
DPO4_SULSO
[Raw transfer]




FTD_A_4(4QWE)
DPO4_SULSO
[Raw transfer]




1FZ_F_7(4Q45)
DPO4_ECOLI
[Raw transfer]




TTP_A_4(3OSN)
POLI_HUMAN
[Raw transfer]




0G8_A_4(4QWA)
DPO4_SULSO
[Raw transfer]




YYY_A_4(4QWB)
DPO4_SULSO
[Raw transfer]




ATP_A_6(1RYR)
DPO4_SULSO
[Raw transfer]




TTP_T_9(4TQR)
DPO4_SULSO
[Raw transfer]




ATP_A_13(1RYS)
DPO4_SULSO
[Raw transfer]




0OH_A_4(4GC6)
DPO4_SULSO
[Raw transfer]




GOL_A_22(3FDS)
DPO4_SULSO
[Raw transfer]




TMP_A_11(2RDJ)
DPO4_SULSO
[Raw transfer]




GOL_A_12(2RDJ)
DPO4_SULSO
[Raw transfer]




DG_A_4(2C28)
DPO4_SULSO
[Raw transfer]




DG_A_4(2BR0)
DPO4_SULSO
[Raw transfer]




EDO_A_16(3FDS)
DPO4_SULSO
[Raw transfer]




DOC_B_17(4QWC)
DPO4_SULSO
[Raw transfer]




103 HHSearch 91.9973%-119 - C5 -4DEZ - ? -
1 PsiBlast_PDB 91.8973%-117 - C5 -4DEZ - ? -
105 HHSearch 86.6728%-116 - C5 -4TQR - DPO4_SULSO -
108 HHSearch 83.4026%-110 - C5 -4F50 - DPO4_SULAC (first) -
126 Fugue 83.0227%-101 - C5 -2W7O - POLK_HUMAN -
131 Fugue 82.7527% -98 - C5 -2OH2 - POLK_HUMAN -
132 Fugue 81.5027% -96 - C5 -1T3N - POLI_HUMAN -
104 HHSearch 80.8729% -98 - C5 -4Q45 3.6 DPO4_ECOLI
125 Fugue 80.0926%-103 - C5 -1K1Q - DPO4_SULSF -
109 HHSearch 79.9126%-104 - C5 -3OSN 3.6 POLI_HUMAN
111 HHSearch 79.7525% -94 - C5 -4ECQ - POLH_HUMAN -
128 Fugue 77.1720%-101 - C5 -2AQ4 - REV1_YEAST -
89 PsiBlast_CBE 76.8433%-117 - C5 -2UVW - DPO4_SULSO -
63 PsiBlast_CBE 76.6033%-115 - C5 -2IBK - DPO4_SULSO -
69 PsiBlast_CBE 76.2933%-115 - C5 -2C28 4.3 DPO4_SULSO
64 PsiBlast_CBE 76.2933%-118 - C5 -2IA6 - DPO4_SULSO -
71 PsiBlast_CBE 76.2733%-113 - C5 -2BR0 4.2 DPO4_SULSO
72 PsiBlast_CBE 76.1933%-114 - C5 -2BQU - DPO4_SULSO -
73 PsiBlast_CBE 76.0733%-116 - C5 -2BQR 3.4 DPO4_SULSO
82 PsiBlast_CBE 76.0433%-114 - C5 -1S97 - DPO4_SULSO -
52 PsiBlast_CBE 75.7733%-117 - C5 -2RDJ 4.0 DPO4_SULSO
2 PsiBlast_PDB 75.6633%-115 - C5 -4QWB 3.9 DPO4_SULSO
34 PsiBlast_CBE 75.3733%-113 - C5 -3FDS 2.8 DPO4_SULSO
5 PsiBlast_PDB 75.2433%-120 - C5 -4TQR 2.9 DPO4_SULSO
11 PsiBlast_PDB 75.2233%-118 - C5 -4QWE 3.4 DPO4_SULSO
18 PsiBlast_PDB 74.9933%-117 - C5 -1RYS 2.6 DPO4_SULSO
6 PsiBlast_PDB 74.6833%-115 - C5 -4QWC 3.3 DPO4_SULSO
19 PsiBlast_PDB 74.6333%-114 - C5 -1S0M 4.8 DPO4_SULSO
9 PsiBlast_PDB 74.6333%-111 - C5 -4QWA 3.7 DPO4_SULSO
30 PsiBlast_CBE 74.5433%-111 - C5 -4GC6 4.2 DPO4_SULSO
17 PsiBlast_PDB 74.5233%-114 - C5 -1RYR 4.4 DPO4_SULSO