@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3080c: (2016-05-16 )
MTDVDPHATRRDLVPNIPAELLEAGFDNVEEIGRGGFGVVYRCVQPSLDRAVAVKVLSTDLDRDNLERFLREQRAMGRLSGHPHIVTVLQVGVLAGGRPFIVMPYHAKNSLETLIRRHGPLDWRETLSIGVKLAGALEAAHRVGTLHRDVKPGNILLTDYGEPQLTDFGIARIAGGFETATGVIAGSPAFTAPEVLEGASPTPASDVYSLGATLFCALTGHAAYERRSGERVIAQFLRITSQPIPDLRKQGLPADVAAAIERAMARHPADRPATAADVGEELRDVQRRNGVSVDEMPLPVELGVERRRSPEAHAAHRHTGGGTPTVPTPPTPATKYRPSVPTGSLVTRSRLTDILRAGGRRRLILIHAPSGFGKSTLAAQWREELSRDGAAVAWLTIDNDDNNEVWFLSHLLESIRRVRPTLAESLGHVLEEHGDDAGRYVLTSLIDEIHENDDRIAVVIDDWHRVSDSRTQAALGFLLDNGCHHLQLIVTSWSRAGLPVGRLRIGDELAEIDSAALRFDTDEAAALLNDAGGLRLPRADVQALTTSTDGWAAALRLAALSLRGGGDATQLLRGLSGASDVIHEFLSENVLDTLEPELREFLLVASVTERTCGGLASALAGITNGRAMLEEAEHRGLFLQRTEDDPNWFRFHQMFADFLHRRLERGGSHRVAELHRRASAWFAENGYLHEAVDHALAAGDPARAVDLVEQDETNLPEQSKMTTLLAIVQKLPTSMVVSRARLQLAIAWANILLQRPAPATGALNRFETALGRAELPEATQADLRAEADVLRAVAEVFADRVERVDDLLAEAMSRPDTLPPRVPGTAGNTAALAAICRFEFAEVYPLLDWAAPYQEMMGPFGTVYAQCLRGMAARNRLDIVAALQNFRTAFEVGTAVGAHSHAARLAGSLLAELLYETGDLAGAGRLMDESYLLGSEGGAVDYLAARYVIGARVKAAQGDHEGAADRLSTGGDTAVQLGLPRLAARINNERIRLGIALPAAVAADLLAPRTIPRDNGIATMTAELDEDSAVRLLSAGDSADRDQACQRAGALAAAIDGTRRPLAALQAQILHIETLAATGRESDARNELAPVATKCAELGLSRLLVDAGLA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]



ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]



AGS_A_2(3ORM)
?
[Raw transfer]



AGS_A_2(3ORP)
?
[Raw transfer]



AGS_A_2(3ORO)
?
[Raw transfer]



AGS_A_2(3ORK)
?
[Raw transfer]



ADP_A_2(3F61)
PKNB_MYCTU
[Raw transfer]



AGS_A_2(3ORT)
?
[Raw transfer]



STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]



MIX_G_7(2FUM)
PKNB_MYCTU
[Raw transfer]



STU_A_3(3PPZ)
CTR1_ARATH
[Raw transfer]



MIX_E_5(2FUM)
PKNB_MYCTU
[Raw transfer]
5 PsiBlast_PDB 78.6236% -50 - C3 -3ORK 5.7 ?
21 PsiBlast_CBE 78.3836% -59 - C3 -2FUM 4.9 PKNB_MYCTU
1 PsiBlast_PDB 78.0336% -49 - C3 -1O6Y 5.5 PKNB_MYCTU
6 PsiBlast_PDB 77.5136% -47 - C3 -3ORO 7.5 ?
3 PsiBlast_PDB 76.9136% -50 - C3 -3ORM 5.4 ?
4 PsiBlast_PDB 75.9536% -50 - C3 -3F61 5.3 PKNB_MYCTU
2 PsiBlast_PDB 75.7136% -47 - C3 -2FUM 5.2 PKNB_MYCTU
8 PsiBlast_PDB 75.3836% -48 - C3 -3ORT 6.5 ?
56 Fugue 75.1016% -42 - C1 -3QA8 - ? -
49 Fugue 74.3516% -34 * C2 *2PZI - PKNG_MYCTU -
7 PsiBlast_PDB 73.3236% -44 - C3 -3ORP 7.0 ?
11 PsiBlast_PDB 72.1127% -72 - C3 -4EQM - ? -
18 PsiBlast_PDB 68.2629% -60 - C3 -3BKB - -
15 PsiBlast_PDB 68.0331% -71 - C3 -3P86 8.1 CTR1_ARATH
19 PsiBlast_PDB 67.4029% -59 - C3 -3CBL - -
31 HHSearch 66.9825% -65 - C3 -4BKY - MELK_HUMAN -
12 PsiBlast_PDB 66.6427% -59 - C3 -4LGD - STK3_HUMAN -
32 HHSearch 66.3622% -65 - C3 -4GV1 - AKT1_HUMAN -
16 PsiBlast_PDB 65.8329% -60 - C3 -3CD3 - -
57 Fugue 65.5926% -64 * C3 *1BYG - CSK_HUMAN -
14 PsiBlast_PDB 64.0332% -58 - C3 -3PPZ 8.5 CTR1_ARATH