@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3085: (2016-05-16 )
MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGLAKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_5(3P19)
?
[Raw transfer]




NAP_D_8(3P19)
?
[Raw transfer]




NAI_C_8(4NBU)
?
[Raw transfer]




NAI_D_9(4NBU)
?
[Raw transfer]




NAI_B_6(4NBU)
?
[Raw transfer]




NDP_A_5(2JAP)
?
[Raw transfer]




NDP_A_5(2JAH)
?
[Raw transfer]




NDP_C_9(2JAP)
?
[Raw transfer]




NAD_G_7(1NFF)
HSD_MYCTU
[Raw transfer]




NDP_B_7(2JAP)
?
[Raw transfer]




NDP_D_11(2JAP)
?
[Raw transfer]




NAI_A_5(4NBU)
?
[Raw transfer]




NAD_C_9(2CFC)
HCDR_XANP2
[Raw transfer]




NAD_B_7(2CFC)
HCDR_XANP2
[Raw transfer]




NAD_E_5(1NFF)
HSD_MYCTU
[Raw transfer]




NAI_K_11(1NFQ)
HSD_MYCTU
[Raw transfer]




NAD_A_5(2CFC)
HCDR_XANP2
[Raw transfer]




NAI_G_7(1NFQ)
HSD_MYCTU
[Raw transfer]




NAD_D_11(2CFC)
HCDR_XANP2
[Raw transfer]




NAI_E_5(1NFQ)
HSD_MYCTU
[Raw transfer]




NAI_A_4(1ZK0)
?
[Raw transfer]




NAI_I_9(1NFQ)
HSD_MYCTU
[Raw transfer]




NAI_A_3(4YAG)
?
[Raw transfer]




NAI_A_3(4YAI)
?
[Raw transfer]




NAD_A_3(1ZK1)
?
[Raw transfer]




NAI_B_5(4YAI)
?
[Raw transfer]




NAI_B_4(4YAG)
?
[Raw transfer]




NAI_A_4(1ZJY)
?
[Raw transfer]




NDP_B_6(3SJ7)
?
[Raw transfer]




NAD_A_4(1ZJZ)
?
[Raw transfer]




NDP_A_3(3SJ7)
?
[Raw transfer]




EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]




AC0_A_4(1ZK4)
?
[Raw transfer]




THJ_A_4(3GED)
?
[Raw transfer]




6 PsiBlast_PDB 83.5938% -82 - C1 -2JAH 11.8 ?
2 PsiBlast_PDB 82.6629% -71 - C1 -3OEC - ? -
21 PsiBlast_CBE 82.4538% -81 - C1 -2JAP 11.5 ?
3 PsiBlast_PDB 81.6138% -80 - C1 -2JAP 11.1 ?
22 PsiBlast_CBE 81.2938% -80 - C1 -2JAP 11.3 ?
8 PsiBlast_PDB 80.7232% -75 - C1 -2ZTL - ? -
36 PsiBlast_CBE 80.4932% -73 - C1 -2ZTL - ? -
1 PsiBlast_PDB 80.1130% -73 - C1 -1YB1 - DHB11_HUMAN -
54 PsiBlast_CBE 79.6134% -75 - C1 -3UVE - ? -
33 PsiBlast_CBE 79.2232% -74 - C1 -2ZTV - ? -
37 PsiBlast_CBE 79.1932% -74 - C1 -2ZTL - ? -
38 PsiBlast_CBE 79.0932% -74 - C1 -1WMB - ? -
23 PsiBlast_CBE 79.0938% -80 - C1 -2JAP 11.1 ?
9 PsiBlast_PDB 78.7832% -70 - C1 -2ZTV - ? -
56 PsiBlast_CBE 78.7734% -74 - C1 -3UVE - ? -
35 PsiBlast_CBE 78.2832% -73 - C1 -2ZTL - ? -
42 PsiBlast_CBE 78.0132% -74 - C1 -2ZTM - ? -
55 PsiBlast_CBE 77.7934% -75 - C1 -3UVE - ? -
14 PsiBlast_PDB 77.5534% -74 - C1 -3UVE - ? -
43 PsiBlast_CBE 77.3332% -72 - C1 -2ZTM - ? -
31 PsiBlast_CBE 72.6035% -72 - C1 -3P19 10.4 ?
65 PsiBlast_CBE 72.3435% -74 - C1 -4YAI 8.2 ?
86 PsiBlast_CBE 72.2232% -67 - C1 -4I08 3.0 FABG_VIBCH
64 PsiBlast_CBE 71.3435% -74 - C1 -4YAI 7.8 ?
67 PsiBlast_CBE 71.2735% -76 - C1 -4YAG 9.1 ?
5 PsiBlast_PDB 71.2435% -70 - C1 -3P19 10.6 ?
66 PsiBlast_CBE 70.3535% -73 - C1 -4YAG 8.3 ?
74 PsiBlast_CBE 70.1732% -72 - C1 -2CFC 6.7 HCDR_XANP2
10 PsiBlast_PDB 69.6234% -71 - C1 -4NBU 10.8 ?
111 PsiBlast_CBE 69.1131% -86 - C1 -3SJ7 9.6 ?
39 PsiBlast_CBE 68.8634% -71 - C1 -4NBU 10.7 ?
41 PsiBlast_CBE 68.1234% -69 - C1 -4NBU 10.8 ?
40 PsiBlast_CBE 67.9034% -69 - C1 -4NBU 11.2 ?
15 PsiBlast_PDB 67.5733% -74 - C1 -1ZJY 7.8 ?
75 PsiBlast_CBE 67.3932% -71 - C1 -2CFC 7.7 HCDR_XANP2
76 PsiBlast_CBE 66.5732% -69 - C1 -2CFC 8.4 HCDR_XANP2
77 PsiBlast_CBE 65.8332% -72 - C1 -2CFC 7.1 HCDR_XANP2
99 PsiBlast_CBE 65.7333% -69 - C1 -1NFQ 8.0 HSD_MYCTU
18 PsiBlast_PDB 65.3633% -71 - C1 -1ZK1 7.4 ?
16 PsiBlast_PDB 64.9133% -71 - C1 -1ZJZ 7.5 ?
98 PsiBlast_CBE 64.5633% -69 - C1 -1NFQ 7.9 HSD_MYCTU
17 PsiBlast_PDB 63.7933% -72 - C1 -1ZK0 8.0 ?
97 PsiBlast_CBE 63.6233% -68 - C1 -1NFQ 7.9 HSD_MYCTU
102 PsiBlast_CBE 63.5033% -68 - C1 -1NFF 8.3 HSD_MYCTU
100 PsiBlast_CBE 62.9533% -70 - C1 -1NFQ 7.8 HSD_MYCTU
112 PsiBlast_CBE 62.8431% -82 - C1 -3SJ7 8.7 ?
101 PsiBlast_CBE 62.7633% -70 - C1 -1NFF 8.5 HSD_MYCTU
91 PsiBlast_CBE 61.7032% -70 - C1 -1ZK4 3.8 ?