@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3106: (2016-05-16 )
MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(2C7G)
FPRA_MYCTU
[Raw transfer]




FAD_A_2(1E1M)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1E1K)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1E1L)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]




FAD_A_5(1E6E)
ADRO_BOVIN
[Raw transfer]




FAD_C_10(1E6E)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1E1N)
ADRO_BOVIN
[Raw transfer]




FAD_A_2(1CJC)
ADRO_BOVIN
[Raw transfer]




1 PsiBlast_PDB 99.72100%-101 - C4 -1LQT - FPRA_MYCTU -
2 PsiBlast_PDB 99.20100% -99 - C4 -1LQU - FPRA_MYCTU -
26 HHSearch 98.7798%-101 - C4 -1LQT - FPRA_MYCTU -
21 PsiBlast_CBE 98.71100%-100 - C4 -1LQU - FPRA_MYCTU -
3 PsiBlast_PDB 98.5999%-101 - C4 -2C7G 13.8 FPRA_MYCTU
22 PsiBlast_CBE 98.46100% -98 - C4 -1LQT - FPRA_MYCTU -
27 HHSearch 79.3640% -88 - C4 -1CJC 13.5 ADRO_BOVIN
5 PsiBlast_PDB 79.2540% -89 - C4 -1E1L 13.0 ADRO_BOVIN
7 PsiBlast_PDB 79.1540% -84 - C4 -1E1M 13.6 ADRO_BOVIN
4 PsiBlast_PDB 79.0940% -86 - C4 -1CJC 13.5 ADRO_BOVIN
6 PsiBlast_PDB 78.6240% -86 - C4 -1E1K 13.6 ADRO_BOVIN
23 PsiBlast_CBE 77.9640% -82 - C4 -1E6E 12.8 ADRO_BOVIN
9 PsiBlast_PDB 77.8840% -85 - C4 -1E6E 12.4 ADRO_BOVIN
8 PsiBlast_PDB 77.5940% -85 - C4 -1E1N 12.4 ADRO_BOVIN
30 HHSearch 59.1928% -80 - C4 -4YLF - ? -
47 Fugue 56.6543% -95 - C4 -1CJC 2.6 ADRO_BOVIN
51 Fugue 53.6226% -60 - C4 -4USR - ? -
36 HHSearch 52.1717% -83 * C4 *3EF6 - TODA_PSEP1 -
29 HHSearch 51.9918% -82 - C4 -1GTE - DPYD_PIG -
33 HHSearch 51.7216% -86 - C4 -3AB1 - FENR_CHLTE -