@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3211: (2016-05-17 )
MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTVGPARKSQGRRRDTDCDGQKTAQHARNTPRRRRTRGGKPVTGHPGTNPISSPIVGGDATSEPGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQDGFAARAN

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_3(4D25)
?
[Raw transfer]




ANP_A_7(2J0S)
IF4A3_HUMAN
[Raw transfer]




8OD_B_7(3NBF)
?
[Raw transfer]




ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]




ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




M2A_A_3(5ELX)
?
[Raw transfer]




ADP_A_3(4D26)
?
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




8OP_C_10(3NBF)
?
[Raw transfer]




ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




ADP_A_3(2PL3)
DDX10_HUMAN
[Raw transfer]




ADP_B_8(3FE2)
DDX5_HUMAN
[Raw transfer]




ADP_A_4(3FE2)
DDX5_HUMAN
[Raw transfer]




8OX_B_6(3MWL)
?
[Raw transfer]




AMP_A_2(2GXQ)
?
[Raw transfer]




AMP_A_8(2GXS)
?
[Raw transfer]




AMP_A_3(3BER)
DDX47_HUMAN
[Raw transfer]




AMP_B_9(2GXS)
?
[Raw transfer]




ADP_A_4(3RRM)
DBP5_YEAST
[Raw transfer]




ANP_A_2(5E7M)
DDX3X_HUMAN
[Raw transfer]




AMP_B_5(3IUY)
DDX53_HUMAN
[Raw transfer]




ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]




8OP_B_6(3MWK)
?
[Raw transfer]




ADP_A_3(3RRN)
DBP5_YEAST
[Raw transfer]




8OP_D_12(3NBF)
?
[Raw transfer]




AMP_A_3(3IUY)
DDX53_HUMAN
[Raw transfer]




ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]




8OD_A_5(3NBF)
?
[Raw transfer]




ADP_A_3(3EWS)
DD19B_HUMAN
[Raw transfer]




AMP_B_6(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_A_3(4KBF)
?
[Raw transfer]




AMP_A_3(4KBF)
?
[Raw transfer]




ADP_A_2(4PXA)
DDX3X_HUMAN
[Raw transfer]




AMP_B_6(2VSX)
IF4A_YEAST
[Raw transfer]




AMP_A_5(2VSX)
IF4A_YEAST
[Raw transfer]




AMP_A_5(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]




AMP_A_2(5E7J)
DDX3X_HUMAN
[Raw transfer]




FLC_D_4(1T6N)
DX39B_HUMAN
[Raw transfer]




FLC_C_3(1T6N)
DX39B_HUMAN
[Raw transfer]




NACID_D_2(4D25)
?
[Raw transfer]

-

NACID_E_1(2DB3)
VASA1_DROME
[Raw transfer]

-

IPA_D_4(1XTI)
DX39B_HUMAN
[Raw transfer]




113 HHSearch 87.3839%-121 - C4 -1HV8 - H669_METJA -
111 HHSearch 86.0444%-112 - C4 -4KBF 4.1 ?
99 HHSearch 85.4633%-104 - C4 -4D25 12.5 ?
1 PsiBlast_PDB 85.2536%-126 - C4 -1HV8 - H669_METJA -
27 PsiBlast_CBE 84.2433%-113 - C4 -3EX7 - IF4A3_HUMAN -
10 PsiBlast_PDB 84.2233%-112 - C4 -2XB2 - IF4A3_HUMAN -
11 PsiBlast_PDB 84.2133%-114 - C4 -2HYI - IF4A3_HUMAN -
28 PsiBlast_CBE 84.1333%-110 - C4 -2HYI - IF4A3_HUMAN -
14 PsiBlast_PDB 84.0133%-112 - C4 -2J0S 7.1 IF4A3_HUMAN
102 HHSearch 83.8532%-117 - C4 -1S2M - DHH1_YEAST -
97 HHSearch 83.8436%-104 - C4 -4PXA - DDX3X_HUMAN -
12 PsiBlast_PDB 83.7933%-111 - C4 -3EX7 - IF4A3_HUMAN -
29 PsiBlast_CBE 83.7633%-109 - C4 -2J0Q - IF4A3_HUMAN -
13 PsiBlast_PDB 83.6433%-108 - C4 -2J0Q - IF4A3_HUMAN -
110 HHSearch 83.2832%-111 - C4 -3FHT 7.0 DD19B_HUMAN
40 PsiBlast_CBE 83.0233%-135 - C4 -2VSO 3.7 IF4A_YEAST
18 PsiBlast_PDB 82.9531%-118 - C4 -1S2M - DHH1_YEAST -
39 PsiBlast_CBE 82.5633%-135 - C4 -2VSO 4.1 IF4A_YEAST
21 PsiBlast_CBE 82.5542%-128 - C4 -4KBG - ? -
37 PsiBlast_CBE 82.2533%-133 - C4 -2VSX 2.3 IF4A_YEAST
104 HHSearch 82.1535%-101 - C4 -2DB3 10.4 VASA1_DROME
2 PsiBlast_PDB 82.1442%-125 - C4 -4KBF 4.2 ?
38 PsiBlast_CBE 81.5333%-132 - C4 -2VSX 3.3 IF4A_YEAST
19 PsiBlast_PDB 81.0933%-105 - C4 -4D25 9.2 ?
9 PsiBlast_PDB 80.3837%-120 - C4 -2I4I 5.7 DDX3X_HUMAN
20 PsiBlast_PDB 80.2633%-105 - C4 -4D26 6.2 ?
44 PsiBlast_CBE 80.0832%-107 - C4 -3FHT 7.1 DD19B_HUMAN
43 PsiBlast_CBE 79.6532%-108 - C4 -3FHT 7.9 DD19B_HUMAN
46 PsiBlast_CBE 79.5132%-108 - C4 -3G0H 6.1 DD19B_HUMAN
45 PsiBlast_CBE 79.4532%-114 - C4 -3EWS 3.2 DD19B_HUMAN
115 HHSearch 79.2835%-112 - C4 -3PEY 6.4 DBP5_YEAST
106 HHSearch 79.1331%-122 - C4 -1XTI 3.7 DX39B_HUMAN
7 PsiBlast_PDB 79.0237%-111 - C4 -5E7M 3.3 DDX3X_HUMAN
33 PsiBlast_CBE 78.4832%-106 - C4 -5ELX 7.3 ?
34 PsiBlast_CBE 78.4332%-106 - C4 -3PEY 6.4 DBP5_YEAST
32 PsiBlast_CBE 78.4332%-106 - C4 -3PEW 7.2 DBP5_YEAST
6 PsiBlast_PDB 78.1137%-108 - C4 -5E7J 5.1 DDX3X_HUMAN
17 PsiBlast_PDB 76.5637%-103 - C4 -4PXA 5.2 DDX3X_HUMAN
30 PsiBlast_CBE 75.7332%-105 - C4 -3RRN 3.4 DBP5_YEAST
31 PsiBlast_CBE 74.7732%-108 - C4 -3RRM 5.6 DBP5_YEAST
49 PsiBlast_CBE 71.3846%-136 - C4 -2GXS 4.0 ?
55 PsiBlast_CBE 70.7545%-142 - C4 -3MWL 3.8 ?
48 PsiBlast_CBE 70.6146%-134 - C4 -2GXS 3.9 ?
50 PsiBlast_CBE 70.4946%-138 - C4 -2GXQ 5.4 ?
52 PsiBlast_CBE 70.3345%-136 - C4 -3NBF 5.3 ?
57 PsiBlast_CBE 69.6345%-137 - C4 -3MWK 4.7 ?
53 PsiBlast_CBE 69.4445%-131 - C4 -3NBF 4.9 ?
54 PsiBlast_CBE 69.1345%-133 - C4 -3NBF 4.1 ?
51 PsiBlast_CBE 68.7745%-140 - C4 -3NBF 5.8 ?
62 PsiBlast_CBE 67.6837%-132 - C4 -3FE2 4.7 DDX5_HUMAN
61 PsiBlast_CBE 67.1337%-130 - C4 -3FE2 4.0 DDX5_HUMAN
67 PsiBlast_CBE 64.2833%-127 - C4 -1T6N 3.1 DX39B_HUMAN
68 PsiBlast_CBE 63.4033%-123 - C4 -1T6N 2.7 DX39B_HUMAN
69 PsiBlast_CBE 62.6535%-124 - C4 -3BER 4.8 DDX47_HUMAN
64 PsiBlast_CBE 61.6736%-146 - C4 -3IUY 4.6 DDX53_HUMAN
76 PsiBlast_CBE 60.7733%-117 - C4 -2PL3 6.3 DDX10_HUMAN
63 PsiBlast_CBE 60.1836%-141 - C4 -3IUY 5.0 DDX53_HUMAN
70 PsiBlast_CBE 59.7337%-118 - C4 -4PX9 5.0 DDX3X_HUMAN
72 PsiBlast_CBE 59.6137%-119 - C4 -4PX9 4.7 DDX3X_HUMAN
71 PsiBlast_CBE 59.5937%-118 - C4 -4PX9 3.4 DDX3X_HUMAN