@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3227: (2016-05-17 )
MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGSELTVSGRIEPGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEVRGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SC1_A_2(1X8R)
AROA_ECOLI
[Raw transfer]




SKP_A_2(1Q36)
AROA_ECOLI
[Raw transfer]




GG9_A_2(2PQ9)
AROA_ECOLI
[Raw transfer]




SKP_A_4(2O0X)
AROA_MYCTU
[Raw transfer]




RC1_A_2(1X8T)
AROA_ECOLI
[Raw transfer]




EPS_A_5(2O0Z)
AROA_MYCTU
[Raw transfer]




S3P_A_5(2O0E)
AROA_MYCTU
[Raw transfer]




S3P_A_6(2O0B)
AROA_MYCTU
[Raw transfer]




S3P_A_6(2O0B)
AROA_MYCTU
[Raw transfer]




S3P_A_5(2O0D)
AROA_MYCTU
[Raw transfer]




S3P_A_2(3FJX)
AROA_ECOLI
[Raw transfer]




S3P_B_2(1MI4)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3FK1)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3FK0)
AROA_ECOLI
[Raw transfer]




S3P_A_2(2QFQ)
AROA_ECOLI
[Raw transfer]




S3P_A_2(2QFS)
AROA_ECOLI
[Raw transfer]




S3P_A_4(3FJZ)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3NVS)
AROA_VIBCH
[Raw transfer]




S3P_A_2(3NVS)
AROA_VIBCH
[Raw transfer]




GPJ_A_4(3NVS)
AROA_VIBCH
[Raw transfer]




GPJ_A_3(2AAY)
AROA_ECOLI
[Raw transfer]




S3P_A_2(1G6S)
AROA_ECOLI
[Raw transfer]




S3P_A_3(1G6T)
AROA_ECOLI
[Raw transfer]




S3P_A_3(2QFU)
AROA_ECOLI
[Raw transfer]




GPF_A_3(3FJZ)
AROA_ECOLI
[Raw transfer]




GPF_A_3(3FK1)
AROA_ECOLI
[Raw transfer]




S3P_A_2(1G6S)
AROA_ECOLI
[Raw transfer]




S3P_A_3(2QFT)
AROA_ECOLI
[Raw transfer]




FMT_A_4(2QFS)
AROA_ECOLI
[Raw transfer]




FMT_A_13(2AA9)
AROA_ECOLI
[Raw transfer]




SKM_A_2(2AA9)
AROA_ECOLI
[Raw transfer]




SKM_A_2(2AAY)
AROA_ECOLI
[Raw transfer]




1 PsiBlast_PDB 98.65100%-114 - C- -2BJB - AROA_MYCTU -
2 PsiBlast_PDB 97.08100%-117 - C2 -2O0B 4.8 AROA_MYCTU
7 PsiBlast_PDB 96.96100%-116 - C2 -2O15 - AROA_MYCTU -
3 PsiBlast_PDB 96.70100%-116 - C2 -2O0D 5.2 AROA_MYCTU
31 HHSearch 96.59100%-116 - C2 -2O0B 4.8 AROA_MYCTU
4 PsiBlast_PDB 96.37100%-116 - C2 -2O0E 4.9 AROA_MYCTU
5 PsiBlast_PDB 96.35100%-114 - C2 -2O0X 9.5 AROA_MYCTU
6 PsiBlast_PDB 96.19100%-115 - C2 -2O0Z 7.2 AROA_MYCTU
35 HHSearch 68.7931% -98 - C2 -3NVS 4.4 AROA_VIBCH
8 PsiBlast_PDB 68.4032%-103 - C2 -3NVS 5.9 AROA_VIBCH
36 HHSearch 66.7223%-103 - C2 -5BUF - ? -
52 Fugue 66.5030% -89 - C2 -1G6S 4.3 AROA_ECOLI
32 HHSearch 64.4927%-101 * C2 *3SLH - AROA_COXBU -
34 HHSearch 64.2722%-103 - C2 -1RF6 - AROA_STRPN -
17 PsiBlast_PDB 63.6132% -85 - C2 -1X8T 5.2 AROA_ECOLI
19 PsiBlast_PDB 63.4432% -84 - C2 -2AAY 5.3 AROA_ECOLI
18 PsiBlast_PDB 63.4332% -87 - C2 -2AA9 3.6 AROA_ECOLI
16 PsiBlast_PDB 63.2932% -86 - C2 -1X8R 7.8 AROA_ECOLI
37 HHSearch 63.2624%-106 - C2 -3RMT - AROA1_BACHD -
15 PsiBlast_PDB 63.2132% -86 - C2 -1G6T 4.0 AROA_ECOLI
12 PsiBlast_PDB 63.1731% -86 - C2 -2QFS 4.3 AROA_ECOLI
20 PsiBlast_PDB 63.0132% -87 - C2 -2PQ9 9.2 AROA_ECOLI
13 PsiBlast_PDB 62.7831% -86 - C2 -2QFT 4.5 AROA_ECOLI
26 PsiBlast_CBE 62.7032% -86 - C2 -1Q36 8.0 AROA_ECOLI
25 PsiBlast_CBE 62.6032% -85 - C2 -3FJX 4.3 AROA_ECOLI
23 PsiBlast_CBE 62.3532% -84 - C2 -1MI4 4.6 AROA_ECOLI
14 PsiBlast_PDB 62.3232% -85 - C2 -1G6S 4.3 AROA_ECOLI
24 PsiBlast_CBE 61.7832% -85 - C2 -3FJZ 5.4 AROA_ECOLI
21 PsiBlast_CBE 61.5431% -83 - C2 -3FK1 4.9 AROA_ECOLI
10 PsiBlast_PDB 61.5331% -86 - C2 -2QFU 4.6 AROA_ECOLI
22 PsiBlast_CBE 61.3831% -85 - C2 -3FK0 4.3 AROA_ECOLI
9 PsiBlast_PDB 60.6031% -84 - C2 -2QFQ 4.6 AROA_ECOLI