@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3248c: (2016-05-18 )
MTGNLVTKNSLTPDVRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQYEKAGVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADN_B_10(3OND)
SAHH_LUPLU
[Raw transfer]




ADN_A_5(3OND)
SAHH_LUPLU
[Raw transfer]




3AD_B_8(3ONF)
SAHH_LUPLU
[Raw transfer]




3AD_A_4(3ONF)
SAHH_LUPLU
[Raw transfer]




ADE_B_10(3ONE)
SAHH_LUPLU
[Raw transfer]




ADE_A_5(3ONE)
SAHH_LUPLU
[Raw transfer]




NAD_B_7(3OND)
SAHH_LUPLU
[Raw transfer]




NAD_B_5(3GLQ)
SAHH_BURP1
[Raw transfer]




NAD_A_3(3OND)
SAHH_LUPLU
[Raw transfer]




NAD_B_6(3ONF)
SAHH_LUPLU
[Raw transfer]




NAD_A_3(3GLQ)
SAHH_BURP1
[Raw transfer]




NAD_A_3(3OND)
SAHH_LUPLU
[Raw transfer]




NAD_A_3(3ONF)
SAHH_LUPLU
[Raw transfer]




NAD_B_7(3ONE)
SAHH_LUPLU
[Raw transfer]




NAD_E_5(1LI4)
SAHH_HUMAN
[Raw transfer]




NAI_A_3(3X2F)
SAHH_THEMA
[Raw transfer]




NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]




NAD_A_3(3D64)
SAHH_BURP1
[Raw transfer]




NAD_B_4(3D64)
SAHH_BURP1
[Raw transfer]




NAI_B_5(4YVF)
SAHH_HUMAN
[Raw transfer]




NAI_A_3(4YVF)
SAHH_HUMAN
[Raw transfer]




1 PsiBlast_PDB 99.30100% -80 - C4 -3DHY - SAHH_MYCTU -
34 PsiBlast_CBE 99.06100% -82 - C4 -3CE6 - SAHH_MYCTU -
35 PsiBlast_CBE 98.96100% -82 - C4 -3CE6 - SAHH_MYCTU -
22 PsiBlast_CBE 98.74100% -82 - C4 -3DHY - SAHH_MYCTU -
23 PsiBlast_CBE 98.67100% -82 - C4 -3DHY - SAHH_MYCTU -
2 PsiBlast_PDB 98.65100% -82 - C4 -2ZIZ - SAHH_MYCTU -
26 PsiBlast_CBE 98.56100% -83 - C4 -2ZJ1 - SAHH_MYCTU -
5 PsiBlast_PDB 98.56100% -83 - C4 -3CE6 - SAHH_MYCTU -
24 PsiBlast_CBE 98.55100% -80 - C4 -2ZJ1 - SAHH_MYCTU -
4 PsiBlast_PDB 98.55100% -82 - C4 -2ZJ1 - SAHH_MYCTU -
3 PsiBlast_PDB 98.40100% -82 - C4 -2ZJ0 - SAHH_MYCTU -
21 PsiBlast_CBE 98.38100% -81 - C4 -3DHY - SAHH_MYCTU -
28 PsiBlast_CBE 98.33100% -81 - C4 -2ZJ0 - SAHH_MYCTU -
29 PsiBlast_CBE 98.31100% -81 - C4 -2ZJ0 - SAHH_MYCTU -
27 PsiBlast_CBE 98.15100% -79 - C4 -2ZJ0 - SAHH_MYCTU -
31 PsiBlast_CBE 98.14100% -80 - C4 -2ZIZ - SAHH_MYCTU -
25 PsiBlast_CBE 98.09100% -82 - C4 -2ZJ1 - SAHH_MYCTU -
33 PsiBlast_CBE 97.62100% -70 - C- -3CE6 - SAHH_MYCTU -
32 PsiBlast_CBE 97.56100% -81 - C4 -2ZIZ - SAHH_MYCTU -
30 PsiBlast_CBE 97.36100% -80 - C4 -2ZIZ - SAHH_MYCTU -
116 HHSearch 87.5461% -79 - C4 -3OND 12.0 SAHH_LUPLU
6 PsiBlast_PDB 87.3959% -80 - C4 -3OND 12.0 SAHH_LUPLU
8 PsiBlast_PDB 87.3159% -79 - C4 -3ONF 11.8 SAHH_LUPLU
38 PsiBlast_CBE 87.1259% -78 - C4 -3OND 12.1 SAHH_LUPLU
7 PsiBlast_PDB 86.9759% -77 - C4 -3ONE 4.5 SAHH_LUPLU
37 PsiBlast_CBE 86.9559% -78 - C4 -3ONE 12.5 SAHH_LUPLU
36 PsiBlast_CBE 86.6159% -80 - C4 -3ONF 12.0 SAHH_LUPLU
115 HHSearch 85.6860% -85 - C4 -3D64 9.7 SAHH_BURP1
10 PsiBlast_PDB 84.7358% -81 - C4 -3D64 9.7 SAHH_BURP1
43 PsiBlast_CBE 84.3958% -80 - C4 -3D64 9.2 SAHH_BURP1
42 PsiBlast_CBE 83.4258% -74 - C4 -3GLQ 11.9 SAHH_BURP1
11 PsiBlast_PDB 82.9458% -72 - C4 -3GLQ 11.5 SAHH_BURP1
16 PsiBlast_PDB 81.5655% -78 - C4 -1LI4 9.7 SAHH_HUMAN
56 PsiBlast_CBE 81.4955% -83 - C4 -4YVF 6.5 SAHH_HUMAN
17 PsiBlast_PDB 81.2955% -82 - C4 -4YVF 6.7 SAHH_HUMAN
121 HHSearch 73.2440% -85 - C4 -3X2F 10.5 SAHH_THEMA