@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3274c: (2016-05-18 )
MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGADSVATCIVIEEVARVDASASLIPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLFGGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COS_A_4(4L1F)
?
[Raw transfer]



CAA_E_5(1JQI)
ACADS_RAT
[Raw transfer]



CAA_B_7(1BUC)
ACDS_MEGEL
[Raw transfer]



CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]



COS_A_4(4L1F)
?
[Raw transfer]



CAA_G_7(1JQI)
ACADS_RAT
[Raw transfer]



COS_B_9(4L1F)
?
[Raw transfer]



FAD_A_4(1UKW)
?
[Raw transfer]



FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_3(3NF4)
?
[Raw transfer]



FAD_A_3(2D29)
?
[Raw transfer]



FAD_A_3(3NF4)
?
[Raw transfer]



FAD_A_9(3MDE)
ACADM_PIG
[Raw transfer]



FAD_C_3(2DVL)
?
[Raw transfer]



FAD_B_11(3MDE)
ACADM_PIG
[Raw transfer]



FAD_B_5(1UKW)
?
[Raw transfer]



FAD_B_7(3MDD)
ACADM_PIG
[Raw transfer]



FAD_D_4(2DVL)
?
[Raw transfer]



FAD_A_5(3MDD)
ACADM_PIG
[Raw transfer]



FDA_A_3(4N5F)
?
[Raw transfer]



FAD_A_4(2UXW)
ACADV_HUMAN
[Raw transfer]



FAD_B_4(2Z1Q)
?
[Raw transfer]
21 PsiBlast_CBE 98.4691% -76 - C1 -3PFD - ? -
23 PsiBlast_CBE 98.0691% -75 - C1 -3PFD - ? -
1 PsiBlast_PDB 97.6191% -76 - C1 -3PFD - ? -
22 PsiBlast_CBE 97.3591% -76 - C1 -3PFD - ? -
113 HHSearch 96.8290% -76 - C1 -3PFD - ? -
24 PsiBlast_CBE 84.8947% -68 - C1 -4L1F 5.2 ?
124 HHSearch 84.2838% -73 - C1 -2JIF - ACDSB_HUMAN -
2 PsiBlast_PDB 84.2047% -67 - C1 -4L1F 4.9 ?
3 PsiBlast_PDB 83.8943% -70 - C1 -1JQI 5.6 ACADS_RAT
62 PsiBlast_CBE 83.7039% -75 - C1 -2JIF - ACDSB_HUMAN -
25 PsiBlast_CBE 83.6443% -70 - C1 -1JQI 5.4 ACADS_RAT
17 PsiBlast_PDB 83.6239% -76 - C1 -2JIF - ACDSB_HUMAN -
5 PsiBlast_PDB 83.6042% -67 - C1 -1UKW 9.7 ?
33 PsiBlast_CBE 83.5642% -67 - C1 -1UKW 9.1 ?
63 PsiBlast_CBE 83.2339% -75 - C1 -2JIF - ACDSB_HUMAN -
61 PsiBlast_CBE 83.1739% -75 - C1 -2JIF - ACDSB_HUMAN -
125 HHSearch 82.9647% -68 * C1 *4L1F 4.9 ?
75 PsiBlast_CBE 82.4836% -64 - C1 -1RX0 - ACAD8_HUMAN -
101 Fugue 82.0042% -66 - C1 -1BUC 8.5 ACDS_MEGEL
74 PsiBlast_CBE 81.9636% -64 - C1 -1RX0 - ACAD8_HUMAN -
34 PsiBlast_CBE 81.5842% -65 - C1 -3MDE 9.8 ACADM_PIG
35 PsiBlast_CBE 81.5342% -63 - C1 -3MDD 9.3 ACADM_PIG
18 PsiBlast_PDB 80.8342% -69 - C1 -1BUC 5.0 ACDS_MEGEL
6 PsiBlast_PDB 80.3542% -67 - C1 -3MDD 8.5 ACADM_PIG
7 PsiBlast_PDB 80.2942% -66 - C1 -3MDE 8.5 ACADM_PIG
130 HHSearch 80.1739% -66 - C1 -2D29 8.2 ?
102 Fugue 79.9034% -65 - C1 -2Z1Q 8.0 ?
69 PsiBlast_CBE 79.8342% -71 - C1 -2DVL 7.7 ?
15 PsiBlast_PDB 79.7143% -67 - C1 -4N5F 9.2 ?
64 PsiBlast_CBE 79.6142% -73 - C1 -1BUC 5.6 ACDS_MEGEL
19 PsiBlast_PDB 79.0542% -71 - C1 -3NF4 8.3 ?
68 PsiBlast_CBE 78.9042% -68 - C1 -2DVL 8.2 ?
116 HHSearch 78.7941% -74 - C1 -3NF4 8.4 ?
103 Fugue 76.2633% -66 - C1 -2UXW 9.5 ACADV_HUMAN