@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3275c: (2016-05-18 )
MTPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRLAGKLTRD

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C2R_I_9(2NSL)
PURE_ECOLI
[Raw transfer]




NIA_A_2(2NSH)
PURE_ECOLI
[Raw transfer]




C2R_I_9(2NSJ)
PURE_ECOLI
[Raw transfer]




AIR_I_9(2FWJ)
?
[Raw transfer]




AIR_A_3(2FWI)
?
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_B_3(2FW6)
?
[Raw transfer]




GOL_B_9(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_M_13(2FWP)
?
[Raw transfer]




CIT_A_3(1U11)
?
[Raw transfer]




FMT_D_26(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




ACY_I_9(2FW1)
?
[Raw transfer]




ACY_M_13(2FW1)
?
[Raw transfer]




21 PsiBlast_CBE 98.6599%-154 - C5 -3LP6 3.0 PURE_MYCTU
22 PsiBlast_CBE 98.1499%-155 - C5 -3LP6 3.6 PURE_MYCTU
23 PsiBlast_CBE 96.3499%-153 - C5 -3LP6 3.6 PURE_MYCTU
67 HHSearch 96.1499%-152 - C5 -3LP6 3.4 PURE_MYCTU
1 PsiBlast_PDB 96.1099%-152 - C5 -3LP6 3.4 PURE_MYCTU
2 PsiBlast_PDB 86.5859%-150 - C5 -1O4V - PURE_THEMA -
59 HHSearch 86.5160%-150 - C5 -1O4V - PURE_THEMA -
49 Fugue 86.4957%-149 - C5 -1O4V - PURE_THEMA -
63 HHSearch 85.0956%-148 - C5 -4GRD - ? -
5 PsiBlast_PDB 84.4559%-152 - C5 -4AY3 - ? -
26 PsiBlast_CBE 83.9559%-151 - C5 -4AY4 - ? -
28 PsiBlast_CBE 83.6959%-150 - C5 -4AY3 - ? -
6 PsiBlast_PDB 83.5759%-147 - C5 -4AY4 - ? -
29 PsiBlast_CBE 83.5359%-153 - C5 -4AY3 - ? -
71 HHSearch 83.5156%-147 - C5 -3ORS - ? -
27 PsiBlast_CBE 83.5159%-151 - C5 -4AY3 - ? -
25 PsiBlast_CBE 83.5159%-150 - C5 -4AY4 - ? -
35 PsiBlast_CBE 83.2661%-146 - C5 -2FWP 4.1 ?
4 PsiBlast_PDB 83.1559%-151 - C5 -4B4K - ? -
18 PsiBlast_PDB 83.1361%-151 - C5 -2FWI 3.7 ?
36 PsiBlast_CBE 83.0261%-145 - C5 -2FW6 3.6 ?
30 PsiBlast_CBE 81.7561%-148 - C5 -1U11 3.7 ?
31 PsiBlast_CBE 81.3761%-150 - C5 -2FW1 3.3 ?
9 PsiBlast_PDB 80.9661%-149 - C5 -2FWJ 4.8 ?
7 PsiBlast_PDB 80.9361%-150 - C5 -1U11 3.8 ?
8 PsiBlast_PDB 80.1561%-148 - C5 -2FW1 3.6 ?
46 PsiBlast_CBE 70.5858%-157 - C5 -2NSL 6.1 PURE_ECOLI
48 PsiBlast_CBE 69.5958%-156 - C5 -2NSH 5.7 PURE_ECOLI
47 PsiBlast_CBE 69.0658%-154 - C5 -2NSJ 6.1 PURE_ECOLI