@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3302c: (2016-05-18 )
MSNPIQAPDGGQGWPAAALGPAQRAVAWKRLGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPYIAAGIFLYDRLGGAKSVPAQRHFTRAGALRLSPGLKRSSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRCSTQVVALLREGDRVIGVGVRDSENGAVAEVRGHVVVNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAMILRTEKSVMFVIPWGSHWIIGTTDTDWNLDLAHPAATKADIDYILGTVNAVLATPLTHADIDGVYAGLRPLLAGESDDTSKLSREHAVAVPAAGLVAIAGGKYTTYRVMAADAIDAAVQFIPARVAPSITEKVSLLGADGYFALVNQAEHVGALQGLHPYRVRHLLDRYGSLISDVLAMAASDPSLLSPITEAPGYLKVEAAYAAAAEGALHLEDILARRMRISIEYPHRGVDCAREVAEVVAPVLGWTAADIDREVANYMARVEAEVLSQAQPDDVSADMLRASAPEARAEILEPVPLD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(3DA1)
?
[Raw transfer]



FAD_A_3(2RGO)
?
[Raw transfer]



FAD_A_2(3DA1)
?
[Raw transfer]



FAD_A_11(2R4J)
GLPD_ECOLI
[Raw transfer]



FAD_B_16(2QCU)
GLPD_ECOLI
[Raw transfer]



FAD_A_15(2QCU)
GLPD_ECOLI
[Raw transfer]



FAD_B_15(2R4E)
GLPD_ECOLI
[Raw transfer]



FAD_A_20(2R46)
GLPD_ECOLI
[Raw transfer]



FAD_A_18(2R45)
GLPD_ECOLI
[Raw transfer]



FAD_A_15(2QCU)
GLPD_ECOLI
[Raw transfer]



FAD_A_14(2R4E)
GLPD_ECOLI
[Raw transfer]



13P_A_16(2R4E)
GLPD_ECOLI
[Raw transfer]
2 PsiBlast_PDB 87.9230%-102 - C1 -2RGH - ? -
8 PsiBlast_PDB 86.5228%-100 - C1 -2RGO 12.3 ?
112 HHSearch 84.5029% -94 - C1 -2RGH - ? -
111 HHSearch 79.8532% -92 - C1 -3DA1 12.7 ?
113 HHSearch 79.3733% -92 - C1 -2QCU 12.2 GLPD_ECOLI
1 PsiBlast_PDB 73.8135%-104 * C2 *3DA1 12.7 ?
5 PsiBlast_PDB 71.3232% -79 - C1 -2R46 13.0 GLPD_ECOLI
4 PsiBlast_PDB 71.2132% -79 - C1 -2R45 11.3 GLPD_ECOLI
24 PsiBlast_CBE 70.7932% -81 - C1 -2QCU 13.2 GLPD_ECOLI
6 PsiBlast_PDB 70.7832% -81 - C1 -2R4E 10.1 GLPD_ECOLI
22 PsiBlast_CBE 70.7632% -78 - C1 -2R46 - GLPD_ECOLI -
3 PsiBlast_PDB 70.6332% -81 - C1 -2QCU 10.5 GLPD_ECOLI
7 PsiBlast_PDB 70.5932% -80 - C1 -2R4J 12.1 GLPD_ECOLI
21 PsiBlast_CBE 70.4332% -81 - C1 -2R4E 11.6 GLPD_ECOLI
23 PsiBlast_CBE 70.3732% -79 - C1 -2R45 - GLPD_ECOLI -
109 Fugue 59.5319% -78 - C1 -4OPU - ? -
117 HHSearch 55.3417% -93 - C1 -1RYI - GLOX_BACSU -
115 HHSearch 55.2619% -76 * C1 *1Y56 - ? -
114 HHSearch 51.7519% -69 - C1 -4X9M - Y051_MYCPN -
116 HHSearch 51.5820% -86 - C1 -4YSH - ? -