@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3303c: (2016-05-18 )
MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLMAHDDLDCTAAQDAAEQLALVPHHLPTSN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_7(1XDI)
LPDA_MYCTU
[Raw transfer]




FAD_A_5(1XDI)
LPDA_MYCTU
[Raw transfer]




31 HHSearch 98.96100%-131 - C1 -1XDI 11.9 LPDA_MYCTU
1 PsiBlast_PDB 98.96100%-131 - C1 -1XDI - LPDA_MYCTU -
21 PsiBlast_CBE 98.01100%-134 - C1 -1XDI 12.0 LPDA_MYCTU
41 HHSearch 69.6327%-113 * C1 *3URH - ? -
49 HHSearch 67.2125%-110 - C1 -1ZMD - DLDH_HUMAN -
2 PsiBlast_PDB 66.1827%-114 - C1 -1EBD - DLDH1_GEOSE -
50 HHSearch 65.4827%-111 - C1 -2YQU - ? -
43 HHSearch 65.0425%-111 - C1 -4JQ9 - ? -
44 HHSearch 64.9027%-109 - C1 -2EQ6 - ? -
47 HHSearch 64.0228%-109 - C1 -2A8X - DLDH_MYCTU -
37 HHSearch 61.8925%-105 - C1 -1OJT - ? -
15 PsiBlast_PDB 61.7825%-110 - C1 -2F5Z - DLDH_HUMAN -
34 HHSearch 61.0224%-109 - C1 -2QAE - DLDH_TRYCR -
8 PsiBlast_PDB 60.2928%-105 - C1 -3II4 - DLDH_MYCTU -
18 PsiBlast_PDB 60.2125%-106 - C1 -4JQ9 - ? -
17 PsiBlast_PDB 60.1725%-109 - C1 -4JDR - DLDH_ECOLI -
51 HHSearch 60.1026%-107 - C1 -1DXL - DLDH_PEA -
9 PsiBlast_PDB 59.9428%-105 - C1 -4M52 - DLDH_MYCTU -
32 HHSearch 59.9126%-107 - C1 -1LVL - DLDH1_PSEPU -
13 PsiBlast_PDB 59.4225%-110 - C1 -1ZMC - DLDH_HUMAN -