@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3309c: (2016-05-18 )
MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRDAPCEPVPIRTPLAETVGSRLTKPPLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPVPYLDSLPDDLTDVPVMVLDPMVATGGSMTHTLGLLISRGAADITVLCVVAAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_H_8(1XTT)
UPP_SULSO
[Raw transfer]




U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_D_4(1I5E)
UPP_BACCL
[Raw transfer]




U5P_O_15(1O5O)
UPP_THEMA
[Raw transfer]




U5P_Q_17(1O5O)
UPP_THEMA
[Raw transfer]




U5P_G_7(1XTT)
UPP_SULSO
[Raw transfer]




U5P_E_5(1XTT)
UPP_SULSO
[Raw transfer]




U5P_B_11(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_D_9(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_P_16(1O5O)
UPP_THEMA
[Raw transfer]




U5P_F_6(1XTT)
UPP_SULSO
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




PRP_A_4(1VST)
UPP_SULSO
[Raw transfer]




U5P_A_12(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_C_10(1UPU)
UPP_TOXGO
[Raw transfer]




PRP_A_7(3G6W)
UPP_SULSO
[Raw transfer]




PRP_B_16(1JLS)
UPP_TOXGO
[Raw transfer]




URA_D_18(1JLS)
UPP_TOXGO
[Raw transfer]




URA_A_16(1BD4)
UPP_TOXGO
[Raw transfer]




URA_B_15(1BD4)
UPP_TOXGO
[Raw transfer]




URF_B_19(1UPF)
UPP_TOXGO
[Raw transfer]




URA_C_14(1BD4)
UPP_TOXGO
[Raw transfer]




URA_D_13(1BD4)
UPP_TOXGO
[Raw transfer]




URA_C_19(1JLS)
UPP_TOXGO
[Raw transfer]




URA_A_17(1JLS)
UPP_TOXGO
[Raw transfer]




URF_D_17(1UPF)
UPP_TOXGO
[Raw transfer]




URF_A_20(1UPF)
UPP_TOXGO
[Raw transfer]




URF_C_18(1UPF)
UPP_TOXGO
[Raw transfer]




POP_C_14(3G6W)
UPP_SULSO
[Raw transfer]




POP_B_12(3G6W)
UPP_SULSO
[Raw transfer]




HSX_D_18(3G6W)
UPP_SULSO
[Raw transfer]




ACY_I_9(1XTT)
UPP_SULSO
[Raw transfer]




ACY_J_10(1XTT)
UPP_SULSO
[Raw transfer]




76 HHSearch 80.4948%-132 - C5 -1O5O 6.8 UPP_THEMA
21 PsiBlast_CBE 80.4048%-135 - C5 -1O5O 6.4 UPP_THEMA
23 PsiBlast_CBE 80.1148%-137 - C5 -1O5O 6.3 UPP_THEMA
2 PsiBlast_PDB 80.0348%-133 - C5 -1O5O 6.8 UPP_THEMA
25 PsiBlast_CBE 79.9044%-129 - C5 -2EHJ - UPP_ECOLI -
26 PsiBlast_CBE 79.8344%-130 - C5 -2EHJ - UPP_ECOLI -
22 PsiBlast_CBE 79.7848%-131 - C5 -1O5O 6.6 UPP_THEMA
72 HHSearch 79.6045%-128 - C5 -2EHJ - UPP_ECOLI -
27 PsiBlast_CBE 79.4744%-130 - C5 -2EHJ - UPP_ECOLI -
3 PsiBlast_PDB 79.4444%-135 - C5 -1I5E 5.6 UPP_BACCL
24 PsiBlast_CBE 78.6344%-135 - C5 -1I5E 5.5 UPP_BACCL
4 PsiBlast_PDB 78.3244%-129 - C5 -2EHJ - UPP_ECOLI -
74 HHSearch 78.0745%-133 - C5 -1I5E 5.6 UPP_BACCL
73 HHSearch 77.8047%-135 - C5 -3DMP - UPP_BURPS -
5 PsiBlast_PDB 77.7045%-136 - C5 -3DMP - UPP_BURPS -
70 HHSearch 77.1144%-137 - C5 -1V9S - UPP_THET2 -
11 PsiBlast_PDB 76.9734%-133 - C5 -1VST 5.1 UPP_SULSO
37 PsiBlast_CBE 76.5334%-129 - C5 -1XTU - UPP_SULSO -
38 PsiBlast_CBE 76.3234%-127 - C5 -1XTU - UPP_SULSO -
36 PsiBlast_CBE 76.3034%-128 - C5 -1XTV - UPP_SULSO -
31 PsiBlast_CBE 76.0134%-130 - C5 -3G6W 3.0 UPP_SULSO
52 PsiBlast_CBE 75.9436%-134 - C5 -1UPF 2.6 UPP_TOXGO
45 PsiBlast_CBE 75.8934%-132 - C5 -1XTT 7.0 UPP_SULSO
12 PsiBlast_PDB 75.7034%-128 - C5 -3G6W 5.0 UPP_SULSO
8 PsiBlast_PDB 75.5434%-128 - C5 -1XTT 7.5 UPP_SULSO
47 PsiBlast_CBE 75.5036%-132 - C5 -1UPU 4.8 UPP_TOXGO
54 PsiBlast_CBE 75.3936%-131 - C5 -1JLS 3.0 UPP_TOXGO
59 PsiBlast_CBE 75.2836%-137 - C5 -1BD4 3.9 UPP_TOXGO
51 PsiBlast_CBE 75.0536%-131 - C5 -1UPF 2.8 UPP_TOXGO
50 PsiBlast_CBE 74.7736%-131 - C5 -1UPF 4.3 UPP_TOXGO
16 PsiBlast_PDB 74.7036%-129 - C5 -1BD4 2.9 UPP_TOXGO
49 PsiBlast_CBE 74.4036%-127 - C5 -1UPU 5.4 UPP_TOXGO
14 PsiBlast_PDB 74.2336%-131 - C5 -1UPF 4.3 UPP_TOXGO
61 PsiBlast_CBE 74.2236%-131 - C5 -1BD4 3.2 UPP_TOXGO
13 PsiBlast_PDB 74.2036%-131 - C5 -1UPU 4.4 UPP_TOXGO
32 PsiBlast_CBE 74.1634%-137 - C5 -3G6W 3.1 UPP_SULSO
48 PsiBlast_CBE 74.1436%-130 - C5 -1UPU 4.7 UPP_TOXGO
46 PsiBlast_CBE 74.0734%-136 - C5 -1XTT 6.8 UPP_SULSO
53 PsiBlast_CBE 73.9136%-134 - C5 -1JLS 2.4 UPP_TOXGO
55 PsiBlast_CBE 73.6236%-135 - C5 -1JLS 3.3 UPP_TOXGO
17 PsiBlast_PDB 73.5236%-126 - C5 -1JLS 2.9 UPP_TOXGO
44 PsiBlast_CBE 73.4934%-138 - C5 -1XTT 6.8 UPP_SULSO
60 PsiBlast_CBE 73.2636%-129 - C5 -1BD4 2.3 UPP_TOXGO
33 PsiBlast_CBE 71.9834%-134 - C5 -3G6W 3.1 UPP_SULSO