@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3313c: (2016-05-18 )
MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTVAVMQTPEALYRVAFECAQDLAADSVVYAEVRFAPELHISCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRHAAMSREIAELAIRFRDKGVVGFDIAGAEAGHPPTRHLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FR6_A_3(2E1W)
ADA_BOVIN
[Raw transfer]




EH9_A_3(2Z7G)
ADA_BOVIN
[Raw transfer]




PRH_A_3(1KRM)
ADA_BOVIN
[Raw transfer]




FR4_A_3(1UML)
ADA_BOVIN
[Raw transfer]




FR3_A_3(1NDY)
ADA_BOVIN
[Raw transfer]




3D1_A_2(3IAR)
ADA_HUMAN
[Raw transfer]




FRL_A_3(1WXZ)
ADA_BOVIN
[Raw transfer]




HPR_A_3(2ADA)
ADA_MOUSE
[Raw transfer]




FR2_A_3(1NDW)
ADA_BOVIN
[Raw transfer]




FRC_A_3(1V7A)
ADA_BOVIN
[Raw transfer]




FR7_A_3(1V79)
ADA_BOVIN
[Raw transfer]




UNL_A_7(4DZH)
?
[Raw transfer]




43 Fugue 94.3430% -96 - C3 -1A4M - ADA_MOUSE -
13 PsiBlast_PDB 94.0027%-103 - C3 -2Z7G 6.0 ADA_BOVIN
21 HHSearch 93.3329% -92 - C3 -3IAR 5.9 ADA_HUMAN
8 PsiBlast_PDB 93.2227%-101 - C3 -1V7A 6.8 ADA_BOVIN
9 PsiBlast_PDB 93.2127%-101 - C3 -1VFL - ADA_BOVIN -
3 PsiBlast_PDB 93.2127%-101 - C3 -1NDY 6.0 ADA_BOVIN
7 PsiBlast_PDB 93.1127%-102 - C3 -1V79 6.5 ADA_BOVIN
6 PsiBlast_PDB 93.0027%-103 - C3 -1UML 9.3 ADA_BOVIN
14 PsiBlast_PDB 92.7227% -99 - C3 -1W1I - ADA_BOVIN -
17 PsiBlast_PDB 92.3327% -99 - C3 -2BGN - ADA_BOVIN -
11 PsiBlast_PDB 92.2927%-100 - C3 -1WXZ 6.3 ADA_BOVIN
4 PsiBlast_PDB 92.1727%-103 - C3 -1NDZ - ADA_BOVIN -
2 PsiBlast_PDB 92.1627%-100 - C3 -1NDW 5.5 ADA_BOVIN
10 PsiBlast_PDB 91.8827% -99 - C3 -1WXY - ADA_BOVIN -
16 PsiBlast_PDB 91.6927%-102 - C3 -1QXL - ADA_BOVIN -
1 PsiBlast_PDB 91.4427%-101 - C3 -1NDV - ADA_BOVIN -
12 PsiBlast_PDB 91.3527% -99 - C3 -2E1W 7.0 ADA_BOVIN
15 PsiBlast_PDB 90.3827% -97 - C3 -1KRM 4.2 ADA_BOVIN
5 PsiBlast_PDB 90.1127%-101 - C3 -1O5R - ADA_BOVIN -
20 PsiBlast_PDB 90.0128% -99 - C3 -1A4M - ADA_MOUSE -