@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3318: (2016-05-18 )
MICQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEDDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLDLEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDLALTQTPSGPVATGVIAYELATGDIHVFHAKAVVIATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTGLAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVLEVLEGRGAGPLKDYVYIDVRHLGEEVLEAKLPDITEFARTYLGVDPVTELVPVYPTCHYLMGGIPTTVTGQVLRDNTSVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAASYAQGHDFVDMPPNPEAMVVGWVSDILSEHGNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVHDKGKRFNTDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDVNYMRHTMAYKEIGADKEGPELRSDVRLDFKPVVQTRYEPKERKY

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(3AE4)
SDHA_PIG
[Raw transfer]




FAD_A_5(3SFE)
SDHA_PIG
[Raw transfer]




FAD_A_5(3ABV)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEB)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE2)
SDHA_PIG
[Raw transfer]




FAD_A_6(2H89)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AE6)
SDHA_PIG
[Raw transfer]




FAD_A_5(3SFD)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEC)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE3)
SDHA_PIG
[Raw transfer]




FAD_A_6(1YQ3)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AEA)
SDHA_PIG
[Raw transfer]




FAD_A_5(1ZOY)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE9)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AED)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEF)
SDHA_PIG
[Raw transfer]




FAD_A_6(1YQ4)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AE1)
SDHA_PIG
[Raw transfer]




FAD_A_5(1ZP0)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEE)
SDHA_PIG
[Raw transfer]




FUM_A_15(1JRX)
FRDA_SHEFR
[Raw transfer]




FAD_A_5(3AE5)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE8)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE7)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEG)
SDHA_PIG
[Raw transfer]




FAD_A_5(4YTP)
SDHA_PIG
[Raw transfer]




FAD_A_8(1NEN)
SDHA_ECOLI
[Raw transfer]




3NP_A_10(1ZP0)
SDHA_PIG
[Raw transfer]




MEZ_A_8(1Y0P)
FRDA_SHEFR
[Raw transfer]




FAD_A_5(4YXD)
?
[Raw transfer]




FAD_A_8(1NEK)
SDHA_ECOLI
[Raw transfer]




FAD_A_6(2ACZ)
SDHA_ECOLI
[Raw transfer]




3NP_A_11(1YQ4)
SDHA_CHICK
[Raw transfer]




102 HHSearch 96.0849% -77 - C2 -2H88 - SDHA_CHICK -
63 PsiBlast_CBE 95.1544% -80 - C2 -4YT0 - ? -
65 PsiBlast_CBE 94.9544% -77 - C2 -4YSZ - ? -
103 HHSearch 94.9048% -73 - C2 -2WDQ - SDHA_ECOLI -
58 PsiBlast_CBE 94.8844% -75 - C2 -5C2T - ? -
68 PsiBlast_CBE 94.6844% -77 - C2 -4YSY - ? -
59 PsiBlast_CBE 94.6644% -74 - C2 -4YTN - ? -
70 PsiBlast_CBE 94.6344% -77 - C2 -4YSX - ? -
57 PsiBlast_CBE 94.5844% -79 - C2 -5C2T - ? -
61 PsiBlast_CBE 94.5744% -75 * C2 *4YTM - ? -
67 PsiBlast_CBE 94.5044% -77 - C2 -4YSY - ? -
64 PsiBlast_CBE 94.4944% -79 - C2 -4YT0 - ? -
60 PsiBlast_CBE 94.4244% -77 - C2 -4YTN - ? -
69 PsiBlast_CBE 94.3844% -75 - C2 -4YSX - ? -
77 PsiBlast_CBE 94.3644% -74 - C2 -3VR8 - ? -
76 PsiBlast_CBE 94.3244% -77 - C2 -3VR9 - ? -
75 PsiBlast_CBE 94.2044% -76 - C2 -3VR9 - ? -
73 PsiBlast_CBE 94.1444% -77 - C2 -3VRA - ? -
72 PsiBlast_CBE 94.1144% -77 - C2 -3VRB - ? -
62 PsiBlast_CBE 93.9544% -76 - C2 -4YTM - ? -
42 PsiBlast_CBE 91.1647% -77 - C2 -3AEB 11.1 SDHA_PIG
55 PsiBlast_CBE 90.8447% -77 - C2 -1YQ4 10.4 SDHA_CHICK
13 PsiBlast_PDB 90.7847% -78 - C2 -3ABV 10.8 SDHA_PIG
14 PsiBlast_PDB 90.7147% -78 - C2 -3AE1 11.2 SDHA_PIG
41 PsiBlast_CBE 90.6647% -77 - C2 -3AEC 9.4 SDHA_PIG
47 PsiBlast_CBE 90.5747% -78 - C2 -4YTP 11.6 SDHA_PIG
43 PsiBlast_CBE 90.5747% -78 - C2 -3AEA 10.5 SDHA_PIG
46 PsiBlast_CBE 90.5547% -76 - C2 -4YXD 11.8 ?
56 PsiBlast_CBE 90.4647% -76 - C2 -1YQ3 11.1 SDHA_CHICK
40 PsiBlast_CBE 90.3347% -77 - C2 -3AED 10.5 SDHA_PIG
39 PsiBlast_CBE 90.2847% -76 - C2 -3AEE 11.0 SDHA_PIG
35 PsiBlast_CBE 90.2147% -78 - C2 -3SFE 11.4 SDHA_PIG
45 PsiBlast_CBE 90.0747% -78 - C2 -3AE8 10.3 SDHA_PIG
38 PsiBlast_CBE 90.0347% -76 - C2 -3AEF 10.3 SDHA_PIG
18 PsiBlast_PDB 90.0347% -76 - C2 -3AE5 10.3 SDHA_PIG
44 PsiBlast_CBE 89.9247% -75 - C2 -3AE9 11.5 SDHA_PIG
17 PsiBlast_PDB 89.8947% -74 - C2 -3AE4 9.6 SDHA_PIG
16 PsiBlast_PDB 89.8747% -78 - C2 -3AE3 9.9 SDHA_PIG
20 PsiBlast_PDB 89.8547% -77 - C2 -3AE7 9.9 SDHA_PIG
19 PsiBlast_PDB 89.8547% -78 - C2 -3AE6 10.2 SDHA_PIG
15 PsiBlast_PDB 89.6347% -76 - C2 -3AE2 11.6 SDHA_PIG
37 PsiBlast_CBE 89.5347% -78 - C2 -3AEG 11.5 SDHA_PIG
36 PsiBlast_CBE 89.3847% -77 - C2 -3SFD 11.2 SDHA_PIG
12 PsiBlast_PDB 88.8147% -75 - C2 -1ZP0 10.9 SDHA_PIG
11 PsiBlast_PDB 88.6647% -75 - C2 -1ZOY 10.4 SDHA_PIG
50 PsiBlast_CBE 88.6547% -77 - C2 -2H89 11.5 SDHA_CHICK
2 PsiBlast_PDB 88.2548% -70 - C2 -1NEN 10.2 SDHA_ECOLI
1 PsiBlast_PDB 87.9348% -69 - C2 -1NEK 10.5 SDHA_ECOLI
3 PsiBlast_PDB 87.8148% -70 - C2 -2ACZ 10.2 SDHA_ECOLI