@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3336c: (2016-05-19 )
MSTPTGSRRIFSGVQPTSDSLHLGNALGAVAQWVGLQDDHDAFFCVVDLHAITIPQDPEALRRRTLITAAQYLALGIDPGRATIFVQSQVPAHTQLAWVLGCFTGFGQASRMTQFKDKSARQGSEATTVGLFTYPVLQAADVLAYDTELVPVGEDQRQHLELARDVAQRFNSRFPGTLVVPDVLIPKMTAKIYDLQDPTSKMSKSAGTDAGLINLLDDPALSAKKIRSAVTDSERDIRYDPDVKPGVSNLLNIQSAVTGTDIDVLVDGYAGHGYGDLKKDTAEAVVEFVNPIQARVDELTADPAELEAVLAAGAQRAHDVASKTVQRVYDRLGFLL

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYM_A_10(1I6K)
SYW_GEOSE
[Raw transfer]



TYM_A_10(1I6K)
SYW_GEOSE
[Raw transfer]



TYM_A_10(1I6L)
SYW_GEOSE
[Raw transfer]



TYM_A_10(1I6M)
SYW_GEOSE
[Raw transfer]



ATP_A_3(1M83)
SYW_GEOSE
[Raw transfer]



ATP_A_4(1MAU)
SYW_GEOSE
[Raw transfer]



AQP_A_3(2OV4)
SYW_GEOSE
[Raw transfer]



GOL_A_15(1I6L)
SYW_GEOSE
[Raw transfer]



GOL_A_14(1I6M)
SYW_GEOSE
[Raw transfer]



GOL_A_3(3N9I)
SYW_YERPE
[Raw transfer]



TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]



TRP_A_4(3TZL)
SYW_CAMJE
[Raw transfer]



TRP_A_4(3TZL)
SYW_CAMJE
[Raw transfer]



TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]



TRP_A_2(3SZ3)
SYW_VIBCH
[Raw transfer]



TRP_A_2(3SZ3)
SYW_VIBCH
[Raw transfer]



ANL_A_4(2OV4)
SYW_GEOSE
[Raw transfer]



TRP_E_5(1YI8)
SYW2_DEIRA
[Raw transfer]



ATP_A_2(5DK4)
SYW_GEOSE
[Raw transfer]



5BX_A_5(5DK4)
SYW_GEOSE
[Raw transfer]
1 PsiBlast_PDB 95.6151% -93 - C4 -3N9I - SYW_YERPE -
47 HHSearch 95.3552% -90 - C4 -3N9I 2.2 SYW_YERPE
21 PsiBlast_CBE 94.5351% -96 - C4 -3N9I - SYW_YERPE -
6 PsiBlast_PDB 92.0751% -99 - C4 -1MB2 - SYW_GEOSE -
32 PsiBlast_CBE 91.8951% -98 - C4 -1MAW - SYW_GEOSE -
27 PsiBlast_CBE 91.8651% -97 - C4 -1MB2 - SYW_GEOSE -
28 PsiBlast_CBE 91.8551% -98 - C4 -1MB2 - SYW_GEOSE -
3 PsiBlast_PDB 91.6951% -91 - C4 -1M83 10.0 SYW_GEOSE
4 PsiBlast_PDB 91.4451% -93 - C4 -1MAU 10.2 SYW_GEOSE
29 PsiBlast_CBE 91.2851% -96 - C4 -1MAW - SYW_GEOSE -
2 PsiBlast_PDB 91.2251% -94 - C4 -1I6M 10.3 SYW_GEOSE
25 PsiBlast_CBE 91.0751% -95 - C4 -1MB2 - SYW_GEOSE -
30 PsiBlast_CBE 90.9051% -93 - C4 -1MAW - SYW_GEOSE -
48 HHSearch 90.8848% -90 - C4 -3SZ3 3.4 SYW_VIBCH
7 PsiBlast_PDB 90.8751% -94 - C4 -2OV4 8.8 SYW_GEOSE
24 PsiBlast_CBE 90.8451% -94 - C4 -1MB2 - SYW_GEOSE -
14 PsiBlast_PDB 90.8047% -91 - C4 -3SZ3 3.4 SYW_VIBCH
26 PsiBlast_CBE 90.7551% -94 - C4 -1MB2 - SYW_GEOSE -
44 HHSearch 90.4950%-103 - C4 -3PRH - SYW_BACSU -
8 PsiBlast_PDB 90.4750%-103 - C4 -3PRH - SYW_BACSU -
46 HHSearch 90.2851% -89 - C4 -1I6K 10.6 SYW_GEOSE
12 PsiBlast_PDB 88.6051% -90 - C4 -1I6L 10.8 SYW_GEOSE
11 PsiBlast_PDB 87.0151% -86 - C4 -1I6K 10.6 SYW_GEOSE
52 HHSearch 77.8535% -91 - C4 -3TZL 4.4 SYW_CAMJE
51 HHSearch 77.5833% -94 - C4 -2G36 3.7 SYW_THEMA
37 PsiBlast_CBE 76.3932% -91 - C4 -2G36 3.8 SYW_THEMA
20 PsiBlast_PDB 75.2733% -84 - C4 -3TZL 4.4 SYW_CAMJE
41 PsiBlast_CBE 73.1432% -91 - C4 -1YI8 2.4 SYW2_DEIRA
9 PsiBlast_PDB 52.5651% -8 - C4 -5DK4 3.0 SYW_GEOSE