@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3339c: (2016-05-19 )
MSNAPKIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQPGTVTLTFTPADGSAPIVHEMVSIPEDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLIDDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIGPEQDWLNSEEFLDAIADNLEKELAN

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(4JA8)
IDHP_HUMAN
[Raw transfer]




NDP_B_10(4JA8)
IDHP_HUMAN
[Raw transfer]




NAP_A_3(2CMJ)
IDHC_MOUSE
[Raw transfer]




NDP_B_10(3INM)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(4HCX)
IDH_MYCTU
[Raw transfer]




NAP_A_6(4UMY)
IDHC_HUMAN
[Raw transfer]




NAP_B_4(2CMJ)
IDHC_MOUSE
[Raw transfer]




NAP_A_5(4KZO)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(4UMX)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(4AOU)
?
[Raw transfer]




NAP_B_7(2CMV)
IDHC_MOUSE
[Raw transfer]




NAP_A_4(4HCX)
IDH_MYCTU
[Raw transfer]




NAP_B_7(4HCX)
IDH_MYCTU
[Raw transfer]




NAP_C_12(4KZO)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(4UMX)
IDHC_HUMAN
[Raw transfer]




NDP_A_3(4JA8)
IDHP_HUMAN
[Raw transfer]




NAP_B_5(4UMX)
IDHC_HUMAN
[Raw transfer]




ICT_A_7(1LWD)
IDHP_PIG
[Raw transfer]




NDP_A_4(3INM)
IDHC_HUMAN
[Raw transfer]




NAP_B_9(4KZO)
IDHC_HUMAN
[Raw transfer]




NAP_A_3(3MAS)
IDHC_HUMAN
[Raw transfer]




ICT_A_7(1LWD)
IDHP_PIG
[Raw transfer]




NAP_B_9(4UMY)
IDHC_HUMAN
[Raw transfer]




NAP_A_3(3MAP)
IDHC_HUMAN
[Raw transfer]




NAP_A_2(4AOV)
?
[Raw transfer]




NAP_D_4(1T09)
IDHC_HUMAN
[Raw transfer]




NAP_B_8(4L03)
IDHC_HUMAN
[Raw transfer]




NDP_A_3(4XRX)
IDHC_HUMAN
[Raw transfer]




NAP_C_11(4L03)
IDHC_HUMAN
[Raw transfer]




ICT_B_8(1LWD)
IDHP_PIG
[Raw transfer]




NAP_B_4(3MAP)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(4L03)
IDHC_HUMAN
[Raw transfer]




NAP_B_5(5DE1)
IDHC_HUMAN
[Raw transfer]




NAP_A_4(2CMV)
IDHC_MOUSE
[Raw transfer]




NAP_B_4(3MAS)
IDHC_HUMAN
[Raw transfer]




NAP_C_3(1T09)
IDHC_HUMAN
[Raw transfer]




NDP_C_14(3INM)
IDHC_HUMAN
[Raw transfer]




NAP_B_3(3MAR)
IDHC_HUMAN
[Raw transfer]




NAP_A_3(5DE1)
IDHC_HUMAN
[Raw transfer]




AKG_A_5(3INM)
IDHC_HUMAN
[Raw transfer]




AKG_A_6(4KZO)
IDHC_HUMAN
[Raw transfer]




GOL_B_6(4UMX)
IDHC_HUMAN
[Raw transfer]




GOL_A_7(4JA8)
IDHP_HUMAN
[Raw transfer]




42V_A_4(4XRX)
IDHC_HUMAN
[Raw transfer]




ICT_A_4(2UXR)
?
[Raw transfer]




1 PsiBlast_PDB 96.58100% -95 - C8 -4HCX 8.6 IDH_MYCTU
21 PsiBlast_CBE 96.51100% -95 - C8 -4HCX 7.7 IDH_MYCTU
105 HHSearch 93.9497% -88 - C8 -4HCX 8.6 IDH_MYCTU
2 PsiBlast_PDB 91.7571% -92 - C8 -3US8 - ? -
8 PsiBlast_PDB 89.8865% -87 - C8 -2CMV 9.1 IDHC_MOUSE
95 Fugue 89.5665% -91 - C8 -1LWD 4.4 IDHP_PIG
50 PsiBlast_CBE 89.5365% -87 - C8 -4L06 - IDHC_HUMAN -
3 PsiBlast_PDB 89.2165% -91 - C8 -1LWD 4.4 IDHP_PIG
28 PsiBlast_CBE 89.0865% -86 - C8 -2CMJ 9.0 IDHC_MOUSE
19 PsiBlast_PDB 88.9165% -88 - C8 -4L06 - IDHC_HUMAN -
37 PsiBlast_CBE 88.8265% -90 - C8 -4UMX 10.7 IDHC_HUMAN
7 PsiBlast_PDB 88.8265% -84 - C8 -2CMJ 9.2 IDHC_MOUSE
22 PsiBlast_CBE 88.7565% -92 - C8 -1LWD 4.3 IDHP_PIG
25 PsiBlast_CBE 88.6165% -86 - C8 -1T0L - IDHC_HUMAN -
10 PsiBlast_PDB 88.5764% -90 - C8 -4JA8 10.2 IDHP_HUMAN
16 PsiBlast_PDB 88.5665% -90 - C8 -4UMY 10.9 IDHC_HUMAN
47 PsiBlast_CBE 88.4065% -86 - C8 -4L06 - IDHC_HUMAN -
32 PsiBlast_CBE 88.3965% -91 - C8 -4L04 - IDHC_HUMAN -
13 PsiBlast_PDB 88.1765% -85 - C8 -3INM 7.9 IDHC_HUMAN
12 PsiBlast_PDB 88.1665% -91 - C8 -5DE1 9.9 IDHC_HUMAN
26 PsiBlast_CBE 88.1465% -89 - C8 -1T09 8.6 IDHC_HUMAN
41 PsiBlast_CBE 88.0665% -84 - C8 -3INM 9.1 IDHC_HUMAN
15 PsiBlast_PDB 87.9865% -92 - C8 -4UMX 10.7 IDHC_HUMAN
34 PsiBlast_CBE 87.9264% -90 - C8 -4JA8 9.9 IDHP_HUMAN
40 PsiBlast_CBE 87.4465% -83 - C8 -3INM 7.8 IDHC_HUMAN
46 PsiBlast_CBE 87.3465% -86 - C8 -4L03 10.4 IDHC_HUMAN
39 PsiBlast_CBE 87.2965% -85 - C8 -4KZO 10.0 IDHC_HUMAN
35 PsiBlast_CBE 87.2765% -93 - C8 -5DE1 9.9 IDHC_HUMAN
14 PsiBlast_PDB 87.2565% -86 - C8 -4KZO 10.3 IDHC_HUMAN
18 PsiBlast_PDB 86.9565% -86 - C8 -4L03 10.4 IDHC_HUMAN
38 PsiBlast_CBE 86.5965% -84 - C8 -4KZO 10.0 IDHC_HUMAN
6 PsiBlast_PDB 86.4765% -93 - C8 -3MAS 7.7 IDHC_HUMAN
45 PsiBlast_CBE 86.3365% -87 - C8 -4L03 8.8 IDHC_HUMAN
11 PsiBlast_PDB 86.3165% -93 - C8 -4XRX 8.6 IDHC_HUMAN
108 HHSearch 86.2964% -84 - C8 -4UMX 10.7 IDHC_HUMAN
17 PsiBlast_PDB 85.9665% -86 - C8 -3MAP 8.3 IDHC_HUMAN
4 PsiBlast_PDB 85.9465% -86 - C8 -1T09 9.0 IDHC_HUMAN
106 HHSearch 85.8964% -88 - C8 -4JA8 10.1 IDHP_HUMAN
44 PsiBlast_CBE 85.8765% -86 - C8 -3MAP 7.4 IDHC_HUMAN
42 PsiBlast_CBE 85.8765% -92 - C8 -3MAS 7.5 IDHC_HUMAN
43 PsiBlast_CBE 84.9965% -92 - C8 -3MAR 8.7 IDHC_HUMAN
27 PsiBlast_CBE 84.7565% -83 - C8 -2CMV 8.0 IDHC_MOUSE
36 PsiBlast_CBE 82.7665% -92 - C8 -4UMY 10.5 IDHC_HUMAN
73 PsiBlast_CBE 82.0956% -85 - C8 -4AOU 9.0 ?
76 PsiBlast_CBE 81.2150% -82 - C8 -4AOV 8.5 ?
77 PsiBlast_CBE 80.9350% -84 - C8 -2UXR 2.4 ?