@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3356c: (2016-05-19 )
MGAIMLDGKATRDEIFGDLKQRVAALDAAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDDGLVGDVHPDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAERR

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L34_B_9(4B4V)
?
[Raw transfer]



9L9_B_7(4CJX)
?
[Raw transfer]



9L9_A_5(4CJX)
?
[Raw transfer]



L34_E_5(1DIB)
C1TC_HUMAN
[Raw transfer]



L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]



L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]



NAP_A_3(3NGL)
FOLD_THEAC
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]



NAP_C_4(3NGL)
FOLD_THEAC
[Raw transfer]



NAP_A_4(1DIG)
C1TC_HUMAN
[Raw transfer]



NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]



NAP_A_3(1DIA)
C1TC_HUMAN
[Raw transfer]



NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]



NAP_D_4(1DIB)
C1TC_HUMAN
[Raw transfer]



NAP_B_4(1DIA)
C1TC_HUMAN
[Raw transfer]



NAP_B_5(1DIG)
C1TC_HUMAN
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]



EDO_B_14(4B4U)
?
[Raw transfer]



NAP_A_6(4CJX)
?
[Raw transfer]



NAP_A_6(4CJX)
?
[Raw transfer]



EDO_A_7(4B4U)
?
[Raw transfer]



IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]



NAP_B_7(4B4W)
?
[Raw transfer]



IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]



IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]
33 HHSearch 97.46100%-116 - C8 -2C2X - FOLD_MYCTU -
1 PsiBlast_PDB 97.2599%-116 - C8 -2C2X - FOLD_MYCTU -
2 PsiBlast_PDB 96.6699%-116 - C8 -2C2Y - FOLD_MYCTU -
32 HHSearch 82.9645%-107 - C8 -4B4U 2.7 ?
21 PsiBlast_CBE 82.9144%-111 - C8 -4B4W 5.8 ?
23 PsiBlast_CBE 82.8844%-113 - C8 -4B4U 2.8 ?
35 HHSearch 82.6142%-109 - C8 -3P2O 8.2 FOLD_CAMJE
9 PsiBlast_PDB 82.6142%-112 - C8 -3P2O 8.2 FOLD_CAMJE
4 PsiBlast_PDB 82.5944%-112 - C8 -4B4V - ? -
22 PsiBlast_CBE 82.3944%-112 - C8 -4B4V 6.7 ?
3 PsiBlast_PDB 82.3544%-111 - C8 -4B4U - ? -
5 PsiBlast_PDB 81.4844%-108 - C8 -4B4W - ? -
38 HHSearch 80.8846%-107 - C8 -4A26 - ? -
24 PsiBlast_CBE 80.6346%-114 - C8 -4A26 - ? -
26 PsiBlast_CBE 80.1940%-106 - C8 -4CJX 6.3 ?
6 PsiBlast_PDB 80.1446%-116 - C8 -4A26 - ? -
8 PsiBlast_PDB 79.8446% -99 - C8 -4A5O - FOLD_PSEAE -
52 Fugue 79.7344%-108 * C8 *1B0A - FOLD_ECOLI -
34 HHSearch 79.7346% -99 - C8 -4A5O - FOLD_PSEAE -
36 HHSearch 79.2142%-106 - C8 -4CJX 7.8 ?
11 PsiBlast_PDB 78.9240%-104 - C8 -4CJX 7.8 ?
25 PsiBlast_CBE 78.0742%-110 - C8 -3L07 3.7 FOLD_FRATT
37 HHSearch 77.9542%-105 - C8 -3L07 3.8 FOLD_FRATT
10 PsiBlast_PDB 77.6942%-110 - C8 -3L07 3.8 FOLD_FRATT
31 PsiBlast_CBE 76.4135%-105 - C8 -1A4I 8.8 C1TC_HUMAN
29 PsiBlast_CBE 76.3235%-109 - C8 -1DIB 8.2 C1TC_HUMAN
17 PsiBlast_PDB 76.0635%-103 - C8 -1A4I 9.5 C1TC_HUMAN
28 PsiBlast_CBE 75.7635%-107 - C8 -1DIG 7.4 C1TC_HUMAN
39 HHSearch 75.6737% -98 - C8 -1A4I 9.5 C1TC_HUMAN
15 PsiBlast_PDB 75.5435%-105 - C8 -1DIB 8.3 C1TC_HUMAN
16 PsiBlast_PDB 75.3635%-106 - C8 -1DIG 7.9 C1TC_HUMAN
30 PsiBlast_CBE 75.3535%-106 - C8 -1DIA 8.0 C1TC_HUMAN
14 PsiBlast_PDB 74.8635%-105 - C8 -1DIA 8.0 C1TC_HUMAN
12 PsiBlast_PDB 72.6136%-113 - C8 -3NGL 8.7 FOLD_THEAC
27 PsiBlast_CBE 71.3136%-112 - C8 -3NGL 9.1 FOLD_THEAC