@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3398c: (2016-05-19 )
MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




GST_A_4(4LLS)
?
[Raw transfer]




IPE_A_4(4LLT)
?
[Raw transfer]




IPE_B_9(4LLT)
?
[Raw transfer]




IPE_B_7(3OYR)
?
[Raw transfer]




DST_D_11(3KRF)
?
[Raw transfer]




DST_D_6(3OAC)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




GPP_D_9(3KRP)
?
[Raw transfer]




IPE_B_13(3Q1O)
?
[Raw transfer]




IPE_A_7(3Q1O)
?
[Raw transfer]




IPE_D_24(3Q1O)
?
[Raw transfer]




IPE_C_18(3Q1O)
?
[Raw transfer]




DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]




GST_B_9(4LLS)
?
[Raw transfer]




DST_D_11(3KRO)
?
[Raw transfer]




DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]




GOL_A_5(3Q2Q)
?
[Raw transfer]




GOL_A_2(3LK5)
?
[Raw transfer]




DMA_A_6(4GP2)
?
[Raw transfer]




DMA_B_12(4GP2)
?
[Raw transfer]




IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]




DST_A_6(3OAB)
?
[Raw transfer]




IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_B_7(4LFE)
?
[Raw transfer]




IPE_A_4(4LFG)
?
[Raw transfer]




IPE_B_9(4LFG)
?
[Raw transfer]




IPE_A_4(3WJO)
?
[Raw transfer]




CIT_A_3(3PKO)
?
[Raw transfer]




PPV_A_6(3KRF)
?
[Raw transfer]




IPE_A_3(3WJO)
?
[Raw transfer]




PPV_A_5(3KRP)
?
[Raw transfer]




DMA_A_3(4GP1)
?
[Raw transfer]




IPE_A_5(3KRC)
?
[Raw transfer]




IPE_A_2(3Q2Q)
?
[Raw transfer]




POP_A_3(3OYR)
?
[Raw transfer]




IPE_A_5(3KRO)
?
[Raw transfer]




59 HHSearch 98.6748% -96 - C1 -3NF2 - ? -
1 PsiBlast_PDB 97.2150% -95 * C1 *3NF2 - ? -
62 HHSearch 76.1232% -93 - C1 -1WY0 - ? -
67 HHSearch 71.0132% -89 - C1 -4DHD - ? -
2 PsiBlast_PDB 68.3437% -91 - C1 -1WY0 - ? -
5 PsiBlast_PDB 67.5832% -79 - C1 -4GP2 3.7 ?
21 PsiBlast_CBE 67.2832% -81 - C1 -4GP2 4.8 ?
56 HHSearch 67.1726% -95 - C1 -4LOB - ? -
61 HHSearch 66.8225% -95 - C1 -3APZ - SPS3_ARATH -
3 PsiBlast_PDB 66.5132% -79 - C1 -4DHD - ? -
66 HHSearch 66.0031% -89 - C1 -3LK5 3.0 ?
4 PsiBlast_PDB 65.9532% -79 - C1 -4GP1 4.6 ?
60 HHSearch 65.8927% -83 - C1 -3LMD - ? -
63 HHSearch 65.8326% -85 - C1 -3PKO 3.1 ?
13 PsiBlast_PDB 65.7330% -84 - C1 -3WJO 3.5 ?
15 PsiBlast_PDB 65.1727% -82 - C1 -4JYX - ? -
58 HHSearch 64.9823% -87 - C1 -3AQB - HEXB_MICLU -
19 PsiBlast_PDB 64.7532% -78 - C1 -3Q2Q 3.4 ?
53 HHSearch 64.5425% -92 - C1 -4JXY - ? -
14 PsiBlast_PDB 64.0828% -77 - C1 -4LOB - ? -
75 HHSearch 59.8330% -78 - C1 -1RQJ 4.1 ISPA_ECOLI
37 PsiBlast_CBE 54.2234% -73 - C1 -1RQJ 4.9 ISPA_ECOLI
27 PsiBlast_CBE 53.9331% -72 - C1 -3OYR 3.4 ?
38 PsiBlast_CBE 53.5934% -70 - C1 -1RQJ 4.9 ISPA_ECOLI
39 PsiBlast_CBE 52.1434% -68 - C1 -1RQI 3.4 ISPA_ECOLI
40 PsiBlast_CBE 51.3434% -70 - C1 -1RQI 3.6 ISPA_ECOLI
49 PsiBlast_CBE 41.9333% -58 - C1 -4LFG 5.2 ?
7 PsiBlast_PDB 41.6236% -66 - C1 -3KRC 2.6 ?
9 PsiBlast_PDB 41.6136% -63 - C1 -3KRO 3.0 ?
22 PsiBlast_CBE 41.5936% -50 - C1 -3OAC 2.6 ?
51 PsiBlast_CBE 41.5533% -59 - C1 -4LFE 5.2 ?
8 PsiBlast_PDB 41.5336% -67 - C1 -3KRF 3.3 ?
29 PsiBlast_CBE 41.3937% -57 - C1 -4LLT 3.2 ?
31 PsiBlast_CBE 41.3537% -58 - C1 -4LLS 5.1 ?
35 PsiBlast_CBE 41.3333% -67 - C1 -3Q1O 3.9 ?
11 PsiBlast_PDB 41.2636% -62 - C1 -3OAB 2.7 ?
25 PsiBlast_CBE 41.1136% -51 - C1 -3KRO 3.1 ?
50 PsiBlast_CBE 40.9933% -57 - C1 -4LFG 5.4 ?
30 PsiBlast_CBE 40.8937% -58 - C1 -4LLT 3.5 ?
10 PsiBlast_PDB 40.8836% -62 - C1 -3KRP 3.4 ?
23 PsiBlast_CBE 40.7036% -47 - C1 -3OAB 2.8 ?
36 PsiBlast_CBE 40.5933% -67 - C1 -3Q1O 4.1 ?
33 PsiBlast_CBE 40.1933% -66 - C1 -3Q1O 3.7 ?
20 PsiBlast_PDB 39.9637% -57 - C1 -4LLS 5.5 ?
26 PsiBlast_CBE 39.8936% -50 - C1 -3KRF 3.0 ?
34 PsiBlast_CBE 39.7633% -65 - C1 -3Q1O 3.9 ?
24 PsiBlast_CBE 39.4936% -66 - C1 -3KRP 4.6 ?