@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3419c: (2016-05-19 )
MTTVLGIETSCDETGVGIARLDPDGTVTLLADEVASSVDEHVRFGGVVPEIASRAHLEALGPAMRRALAAAGLKQPDIVAATIGPGLAGALLVGVAAAKAYSAAWGVPFYAVNHLGGHLAADVYEHGPLPECVALLVSGGHTHLLHVRSLGEPIIELGSTVDDAAGEAYDKVARLLGLGYPGGKALDDLARTGDRDAIVFPRGMSGPADDRYAFSFSGLKTAVARYVESHAADPGFRTADIAAGFQEAVADVLTMKAVRAATALGVSTLLIAGGVAANSRLRELATQRCGEAGRTLRIPSPRLCTDNGAMIAAFAAQLVAAGAPPSPLDVPSDPGLPVMQGQVR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_10(3ZEU)
?
[Raw transfer]



ATP_B_14(4WQ5)
TSAD_ECOLI
[Raw transfer]



AGS_E_16(3ZEU)
?
[Raw transfer]



ADP_A_5(4YDU)
TSAD_ECOLI
[Raw transfer]



ADP_B_12(4YDU)
TSAD_ECOLI
[Raw transfer]



ATP_A_6(4WQ4)
TSAD_ECOLI
[Raw transfer]



ATP_A_7(4WQ5)
TSAD_ECOLI
[Raw transfer]



ATP_B_9(4WQ4)
TSAD_ECOLI
[Raw transfer]



ATP_A_3(2IVP)
KAE1_PYRAB
[Raw transfer]



ANP_B_4(2VWB)
KAE1B_METJA
[Raw transfer]



ANP_A_3(2VWB)
KAE1B_METJA
[Raw transfer]



AGS_B_10(3ZEU)
?
[Raw transfer]



ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]



ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]



AMP_B_4(3ZET)
?
[Raw transfer]



ANP_A_3(2IVN)
KAE1_PYRAB
[Raw transfer]



AMP_A_4(3WUH)
QRI7_YEAST
[Raw transfer]
5 PsiBlast_PDB 94.6746%-110 - C3 -4WQ4 5.6 TSAD_ECOLI
18 PsiBlast_CBE 93.7946%-106 - C3 -4YDU 6.4 TSAD_ECOLI
4 PsiBlast_PDB 93.3946%-108 - C3 -4WQ5 7.0 TSAD_ECOLI
3 PsiBlast_PDB 93.2346%-108 - C3 -4YDU 6.5 TSAD_ECOLI
20 PsiBlast_CBE 92.9746%-106 - C3 -4WQ4 6.0 TSAD_ECOLI
19 PsiBlast_CBE 92.8946%-106 - C3 -4WQ5 7.4 TSAD_ECOLI
17 PsiBlast_CBE 89.8548%-108 - C3 -3ZEU 6.9 ?
2 PsiBlast_PDB 89.2548%-107 - C3 -3ZEU 7.7 ?
1 PsiBlast_PDB 88.4648%-107 - C3 -3ZET 6.1 ?
28 HHSearch 87.8743%-100 - C3 -3ZEU 6.6 ?
22 PsiBlast_CBE 85.5834%-111 - C3 -2IVO - KAE1_PYRAB -
48 Fugue 85.0333%-106 * C3 *2IVN 6.6 KAE1_PYRAB
21 PsiBlast_CBE 84.0234%-108 - C3 -2IVO - KAE1_PYRAB -
23 PsiBlast_CBE 83.7334%-109 - C3 -2IVO - KAE1_PYRAB -
6 PsiBlast_PDB 82.4234%-107 - C3 -2IVN 6.7 KAE1_PYRAB
7 PsiBlast_PDB 81.9834%-109 - C3 -2IVO - KAE1_PYRAB -
8 PsiBlast_PDB 81.5634%-108 - C3 -2IVP 6.3 KAE1_PYRAB
27 HHSearch 80.7429%-103 - C3 -4K25 - QRI7_YEAST -
31 HHSearch 80.1433% -99 - C3 -3ENO - KAE1B_THEAC -
11 PsiBlast_PDB 79.1032%-108 - C3 -2VWB 5.7 KAE1B_METJA
30 HHSearch 78.8633% -94 - C3 -2IVN 6.2 KAE1_PYRAB
25 PsiBlast_CBE 78.1432%-111 - C3 -2VWB 5.2 KAE1B_METJA